Does dispersal differ between the sexes? This question, anchored in a body of rich theoretical literature, has received little empirical attention in marine invertebrates. Yet, dispersal is a key ecological process with profound implications for species management and conservation. In this study, we investigated sex-biased dispersal in the European spiny lobster (Palinurus elephas) by sampling females and males from six marine reserves and their surroundings in the northwestern Mediterranean. By genotyping 180 individuals at 8,390 markers, we found that both sexes exhibited panmixia. However, females displayed slightly higher and more geographically structured estimates of genetic differentiation than males, although this difference was not statistically significant. Additionally, we identified sex-linked markers with significant differences in heterozygosity between females and males. These markers not only allowed the sex assignment of 61 individuals of unknown sex but also provided the first evidence for a ZZ/ZW sex determination system in P. elephas. Beyond their fundamental insights, these sex-linked markers hold strong applied potential for species management, particularly in fisheries where sex-specific regulations exist. Our findings underscore the power of genomic markers to study sex-biased dispersal, elucidate sex determination systems, and facilitate sex assignment, with important implications for species conservation and management.