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Twig Age 2.0:  Adjusting twig age data for differences in palatability
Don Waller

Don Waller

October 14, 2024
among taxa to more precisely track deer browse over sites and timeDonald M. Waller*11 Department of BotanyUniversity of Wisconsin–MadisonMadison, WI  53706  USAJournal: Methods in Ecology and Evolution (Research article)* Corresponding author: dmwaller@wisc.edu   +1 (608) 698-6495ORCID:  0000-0001-5377-3929Words:    Abstract:   271 words Main Text (including figure legends) :  6982 words3 Tables;  6 Figures;  57 ReferencesSupplementary Information: 3 Tables and 7 FiguresRunning Head:    Twig Age 2.0Acknowledgements: I thank J. Witt and S. Johnson for helping develop the initial twig age method. The Huron Mountain Wildlife Foundation supported this work. W.S. Alverson, and J. Curteau.provived useful comments on the manuscript. C. Allen-Savietta suggested particular analyses.Conflict of Interest statement: The author has no conflicts of interest.Data Availability – All data and statistical results will be shared publicly on Dryad upon publication. Currently at:  DOI: 10.5061/dryad.8gtht76z5
Shading in mother plant decreasing seed vigor in wheat
Yang LI
Chaolin Sun

Yang LI

and 12 more

September 30, 2024
High seed vigor has the potential to alleviate the adverse effects of unfavorable environmental conditions. Nonetheless, the influence of inevitable global dimming on seed viability remains uncertain. To examine the effects of global shading on seed vigor, we analyzed seed size, seed chemistry, and associated gene expression in four varieties subjected to 60% shade during both the vegetative and reproductive growth periods. Over a four-year average, the thousand kernel weights decreased by 20.18% during the vegetative growth stage and by 3.87% during the reproductive growth stage. Shading during the reproductive stage resulted in a significant increase in average protein content by 17.00%, accompanied by alterations in the protein components gliadin and gluten, as well as their respective ratios. Additionally, a significant reduction in the expression of starch synthesis genes and starch content was observed. The expression of genes involved in abscisic acid (ABA) synthesis was upregulated, while the expression of ABA-metabolizing genes was downregulated, leading to an elevated ABA content. Conversely, both the expression and content of gibberellin (GA3)-related genes were diminished. Principal component analysis (PCA) indicated that the ABA/GA3 ratio exerted the most substantial influence on seed vigor, followed by gliadin content. Our results thus indicated that shading of the mother plant during seed development in wheat decreased subsequent germination by mediating the biosynthesis of ABA, GA3, protein and starch.
Talents Amidst Neurological Impairment; An Interesting Case of Aicardi-Goutières Synd...
pooneh tabibi
Reza Shiari

pooneh tabibi

and 3 more

September 30, 2024
1 INTRODUCTIONAicardi-Goutières syndrome (AGS) is a rare and complex neuroinflammatory disorder characterized by severe neurological problems, skin manifestations, and potential overlap with autoimmune disorders (1). Although most individuals with AGS exhibit profound intellectual disability, it is intriguing to encounter exceptional abilities amidst such challenges (2, 3). In this case report, we present a remarkable and rare instance of AGS, where our patient demonstrates an extraordinary talent in painting and visualizing objects with extraordinary precision and attention to detail (Figure 1). AGS is typically associated with a progressive and debilitating course, leading to significant neurodevelopmental regression and lifelong disabilities (3). Common clinical features include intermittent fever, skin manifestations such as chilblains and ulcers, muscular abnormalities, and elevated levels of interferon-alpha in the cerebrospinal fluid (1, 4). However, the presence of exceptional talents within the context of AGS presents a unique opportunity to explore the multifaceted nature of cognitive abilities in this syndrome (3). This case report aims to shed light on the clinical manifestations of AGS while emphasizing the exceptional artistic talent observed in our patient. By documenting and sharing this remarkable ability, we seek to contribute to a deeper understanding of the cognitive heterogeneity within AGS and inspire further research in this domain. Furthermore, this case underscores the importance of considering AGS in individuals presenting with the described clinical features and highlights the need for comprehensive evaluation, multidisciplinary approaches, and ongoing research to optimize management and support for affected individuals. This report serves as a reminder of the potential for hidden talents and strengths, even in the face of significant neurological challenges, and underscores the importance of embracing the unique abilities of individuals with AGS for a more comprehensive understanding of this rare syndrome.
Synergy of Atopy and Airway Dysbiosis Promotes IL-5 Expression and Asthma Persistence...
Łukasz Dobrakowski
Piotr Lacwik

Łukasz Dobrakowski

and 11 more

September 30, 2024
Background: Recent studies increasingly suggest that airway microbiome plays a critical role in respiratory health and disease, including the potential influence on the development and persistence of asthma in children. This study aims to evaluate the clinical, immunological, and microbiological factors contributing to the persistence of asthma from preschool to school age. Methods: 183 children aged 4-8 years with chronic rhinosinusitis were enrolled in the study, including 82 children (62%) with asthma. Nasopharynx swabs were collected for microbiome analysis using next-generation sequencing methods, and nasal mucosa samples were taken to analyze mRNA expressions of predefined cytokines and innate lymphoid cells (ILCs). Out of the initial cohort, 117 children, including 74 with asthma, remained under observation for the next five years to assess asthma persistence Results: After 5 years asthma persisted in 23% (17 of 74) of patients. A multivariate model of logistic regression analysis revealed that asthma persistence was independently associated with atopy (OR=8.5, 95%CI: 1.7-43) and reduced biodiversity in the upper airway microbiome (OR=6.0, 95%CI: 1.7-22). Additionally, higher nasal expression of TSLP which correlated with IL-5 was observed in children with reduced biodiversity. In children with both atopy and reduced biodiversity higher nasal expression of IL-5 was detected, with the highest risk of persistent asthma. Conclusion: Reduced biodiversity concomitant with atopy is associated with increased risk of asthma persistence. This interaction is associated with higher nasal expression of IL-5. These findings identify new potential targets for the prevention of persistent asthma in children
In-vitro antimicrobial activity of chitosan derived from shrimp co-products against p...
Long-Dinh TRAN
Bach Xuan NGUYEN

Long-Dinh TRAN

and 6 more

September 30, 2024
The global overuse of antibiotics and agrochemicals in Vietnam leads to antibiotic resistance, health risks, and environmental damage. This study evaluates in-vitro antifungal properties of different types of shrimp waste-derived chitosan against Vietnamese agricultural fungi as a sustainable alternative to chemical fungicides. Several pathogenic microbe strains were isolated and identified by morphological and molecular gene sequencing: Neoscytalidium dimidiatum causing brown spot on dragon fruit; Fusarium fujikuroi & Fusarium subglutinans causing banana crown rot; Fusarium oxysporum & Fusarium odoratissimum causing banana stem rot; Lasiodiplodia theobromae causing fruit rot & Colletotrichum queenslandicum causing anthracnose on passion fruit; Fusarium equiseti & Fusarium napiforme causing swollen swim bladder on striped catfish. The antifungal properties of several chitosan types were investigated following the inhibition of fungal mycelial growth method. CTIC15 & OLIC25 demonstrated significant fungal growth inhibition from 90% to 100% at 0.328 g/L to 0.625 g/L for all isolated fungal strains. Chitooligosaccharide COSL02 exhibited antifungal effect against L. theobromae, F. oxysporum, N. dimidiatum, F. odoratissimum with inhibition rates from 53.11±2.74% to 100±0.00% at 0.438 g/L to 0.876 g/L. Low-molecular-weight LV01 displayed broad-spectrum antifungal efficacy, excluding F. subglutinans, with inhibition rates from 74.11±10.36% to 100±0.00 % at 0.2 g/L, and above 42.08±5.87% at 0.1 g/L. Medium-molecular-weight MV01 shared comparable antifungal potency to LV01, except F. equiseti and N. dimidiatum, with inhibition rates from above 74.09±7.09% to 100±0.00% at 0.2 g/L, and above 58.77±0.87% at 0.1 g/L. This study suggested chitosan (shrimp-waste) could serve as effective and sustainable alternative to chemical fungicides in controlling pathogenic microbes.
Revealing genomic traits and evolutionary insights of Oryza officinalis from Southern...
Can Chen
Haifei Hu

Can Chen

and 11 more

September 30, 2024
Wild rice, as the ancestor of cultivated rice, has accumulated a vast array of beneficial traits through prolonged natural selection and evolution. O. officinalis, belonging to the C genome, differs significantly from the A genome. In this study, we utilized second- and third-generation sequencing, along with Hi-C technology, to sequence the genome of MT10 (O. officinalis). The assembled genome size is 552.58 Mb, with N50 lengths of 40.04 Mb and 44.48 Mb for contigs and scaffolds, respectively, and 96.73% of the sequences anchored to 12 chromosomes. The MT10 genome was annotated to 33,813 genes, with repetitive sequences accounting for 54.24% of the genome. The number of unique genes in MT10 is higher than in O. officinalis from Thailand, with their divergence time estimated at 1.3-2.1 million years ago (Mya). The number of expanded gene families in MT10 is lower than that of contracted gene families, with the expanded gene families mainly related to disease and pest resistance. Comparative analysis between the genomes of MT10 and Nipponbare revealed numerous structural variations and sequence differences in some resistance-related genes. The R genes and cystatin gene family in MT10 may confer its unique insect resistance. Transcriptome analysis of MT10 suggests that flavonoid biosynthesis and MAPK-related genes may play important roles in its resistance to brown planthopper (BPH). This study represents the first chromosome-level genome assembly of MT10, providing a reference sequence for the efficient cloning of beneficial genes from O. officinalis, which holds significant implications for the genetic improvement of cultivated rice.
EntoSieve: automated size-sorting of insect bulk samples to aid accurate megabarcodin...
Aleida Ascenzi
Lorenz Wührl

Aleida Ascenzi

and 6 more

September 30, 2024
Insect decline necessitates the development and use of standardized protocols for regular monitoring. These methods have to be rapid, efficient, and cost-effective to allow for large-scale implementation. Many insect sampling and molecular methods have been developed. This includes Malaise trapping, high-throughput DNA barcoding (“megabarcoding”), and metabarcoding. The latter allows for assessing the species diversity in whole samples using few steps, but sample heterogeneity in terms of body size remains a challenge since large insects contribute disproportionately more mtDNA than small ones, potentially overwhelming the template DNA from small species that then go undetected. Size-sorting can mitigate this problem, but no satisfying automated, rapid and non-destructive solutions are available. We introduce the EntoSieve, a low-cost and DIY motorized instrument that disentangles and sorts abundant insect bulk samples into several body-size fractions while minimizing damage to specimens thus reducing the risk of DNA contamination across size fractions (e.g., legs of large specimens in small body-size fraction). EntoSieve utilizes readily available components, 3D-printed parts and customizable meshes, thus enabling parallelization at low cost. We here show the efficiency of the EntoSieve for three samples with more than 10,000 specimens using three sieving protocols and assess the impact on specimen integrity. Efficiency ranged from 92-99% and achieved within 18-60 minutes and specimen damage was not significant for subsamples. By facilitating rapid pre-processing, the device contributes to producing morphologically valuable vouchers for megabarcoding and is likely to improve compositional diversity accuracy across size classes when using metabarcoding.
Development of A Novel Point-of-Care Device Detecting Monkeypox Virus Using Lyophiliz...
Howard James Shi
Joshua David Shi

Howard James Shi

and 3 more

September 30, 2024
Real-time PCR has been used in clinical diagnostics as the gold standard to detect monkeypox virus (MPXV), which causes monkeypox disease (mpox). However, to better prevent the spread of mpox disease, fast and self-administrated detection medical devices are urgently needed. In this study, we employed loop-mediated isothermal amplification (LAMP) to detect mpox using lyophilized microspheres and read the results with color change and lateral flow immunoassay strips. We first tested the optimal temperature for our LAMP assay and found that 65°C gave the best results. We then used this temperature and tested three different primer groups targeting different regions of the MPXV genes and found that the F3L-1 primer outperformed the other two with a limit of detection (LoD) of 70 genome copies per reaction. Adding another primer group to the F3L-1 group only lowered the LoD to 60 genome copies per reaction. For interference assays, we chose substances and/or microorganisms that are commonly applied to or found on patients’ skins and showed that none of them interfered with the testing results at the indicated concentrations. Finally, we tested clinically collected human skin swabs containing MPXV viruses and demonstrated that our assay performed well with these samples at 1x, 2x, 3x, and 5x LoD. Based on these findings, we proposed a medical device that can be used as a point-of-care solution in areas where traditional PCR equipment is not available.
A Case Study on Pulpotomy in Mature Permanent Tooth: Integrating Contemporary Advance...
Simran Kriplani
Shweta Sedani

Simran Kriplani

and 3 more

September 30, 2024
INTRODUCTIONThe concept of ”tissue engineering” was first used to describe the process of creating in a lab a device that could be implanted into a patient to promote the regeneration of specific tissues. This device would contain living cells and biologic mediators (such as growth factors and adhesins) in a synthetic or biologic matrix. Three essential components are often included in tissue engineering: cells (fibroblasts, osteoblasts), signaling molecules (growth factors), and scaffolds (collagen, bone minerals).The dental pulp, a sensitive connective tissue enclosed by the hard walls of the dentin, is crucial to the tooth’s fate yet is frequently disregarded. When the pulp is exposed for any of the following reasons—caries, fractures, cracks, or an exposed restoration margin—it frequently becomes inflamed. If this inflammation is not addressed right once, it may eventually result in pulpal death [1]. Essential pulp treatments such as direct and indirect pulp capping, pulpotomy in the early stages, or pulpectomy, if the lesion shows up in its later stages, are among the therapies for dental pulp illnesses. Maintaining pulpal vitality is critical because the healthy pulp may start several critical processes, including dentin production, provides the tooth with nutrition, allow for defense, and has a special ability for restoration [2]. Therefore, it is preferable to maintain the pulp’s vitality rather than replacing it with an inert root substitute. A crucial pulp treatment called a pulpotomy preserves the remaining radicular pulp while physically removing the coronal component of the pulp. An appropriate substance is positioned over the remaining radicular pulp tissue, which can both stimulate healing and repair and shield the pulp from additional injury [3]. The capacity of the remaining radicular pulp to recover after the infected coronal pulp tissue is removed and appropriate medication is placed is the basis for the logic for pulpotomy operations [4]. Many materials have been recommended for use in pulpotomy operations due to their significant qualities, which include biocompatibility, a good seal, and the ability to effectively combat microbes when in contact with inflamed pulp. One of the most often used and studied materials for these objectives, with good clinical results, is MTA( Mineral trioxide aggregate). PRF preparation: The patients were notified that coronal pulpotomy, an alternative to root canal therapy, was the method of treatment. PRF was created by taking the necessary volume of blood into a 10-mL test tube without the use of an anticoagulant and centrifuging it right away using a portable centrifuge for 10 minutes at 2500 rpm after getting the patient’s written consent. The final product was composed of three layers: a fibrin clot (PRF) in the middle, red blood corpuscles at the bottom, and acellular platelet-poor plasma at the top of the device.Due to the lack of an anticoagulant, blood coagulates as soon as it touches the glass surface. Thus, quick blood collection and centrifugation—before the clotting cascade has started—are crucial for the proper synthesis of PRF. The fibrin clot’s fluids were squeezed out to produce PRF in the shape of a membrane.The care of a carious adult permanent human molar with developed acute irreversible pulpitis is shown and discussed in this case report. Second-generation platelet concentrates (PRF) and a material based on calcium silicate (MTA) for coronal pulpotomy techniques are used in the treatment to evaluate the prognosis of the patient. The clinical and radiological outcomes of the treated case are cross-correlated over systematic follow-up evaluations of the case.
Severe Upper Cervical Injury, Dilemma in Management, and Its Consequences: A Case Rep...
Asmit Pokharel
Laliteshwar Shah

Asmit Pokharel

and 6 more

September 30, 2024
A document by Asmit Pokharel. Click on the document to view its contents.
A pedigree with gene LHX4 and SOX3 mutation resulting in gonadal dysplasia
Zhaoyang Ji
Wenyuan Duan

Zhaoyang Ji

and 6 more

September 30, 2024
A document by Zhaoyang Ji. Click on the document to view its contents.
Development of Lead-free Perovskite Solar Cells: Advancements, Challenges, and Sustai...
Shanshan Gao
Jeong-Ju Bae

Shanshan Gao

and 4 more

September 30, 2024
Perovskite solar cells (PSCs) have attracted considerable attention in the field of photovoltaics owing to their high power conversion efficiency (PCE), cost-effective production methods, and versatile applications. However, the widespread use of lead (Pb)-based materials in PSCs poses challenges related to their toxicity and environmental sustainability. This review explores recent advances in the development of Pb-free perovskite materials, such as tin (Sn)-based, germanium (Ge)-based, and other B(IV) and B(III) cation alternatives, while assessing their electronic properties, stability, and performance-enhancing strategies. Additionally, we discuss the use of green solvents and fabrication techniques to minimize their environmental impact. This review aims to guide future research toward safe, efficient, and environmentally sustainable PSC technologies, ensuring that the benefits of solar energy can be harnessed without compromising human health or the environment.
Exposure to Pseudoephedrine During Pregnancy and Major Congenital Malformations: a po...
Saar  Dor
Tal Michael

Saar Dor

and 7 more

September 30, 2024
Aim: To assess the risk of major congenital malformations following first-trimester PSE exposure. Methods: A population-based retrospective cohort study was conducted on pregnancies of women aged 15-49 years, insured by Clalit Health Services in southern Israel, who gave birth or had elective pregnancy terminations due to suspected fetal malformation at Soroka Medical Center (1999-2017). The study focused on the drug Clarinase (120 mg PSE, 5 mg loratadine). Multivariate negative binomial regression models were used to evaluate the risk for major congenital malformations, adjusting for potential confounders. Results: Of 251,543 pregnancies, 313 (0.12%) were exposed to Clarinase in the first trimester. PSE exposure was not associated with major congenital malformations overall (adjusted Relative Risk [aRR] = 0.90, 95% CI 0.558-1.45; p=0.66) or by organ system (cardiovascular: aRR = 0.938, p=0.841; central nervous: aRR = 0.618, p=0.633; musculoskeletal: aRR = 1.800, p=0.155; gastrointestinal: aRR = 1.013, p=0.990; genitourinary: aRR = 0.704, p=0.547). Conclusion: First-trimester PSE exposure was not associated with major congenital malformations, either overall or by organ system.
Polygonum capitatum combined with Ciprofloxacin Ameliorated Chronic Bacterial Prostat...
Yuhong Huang
Shanshan Fan

Yuhong Huang

and 8 more

September 30, 2024
Background and Purpose: Chronic bacterial prostatitis (CBP) is an inflammatory disease caused by persistent bacterial infection and reflux into the urethra resulting in overactivation of the prostate immune system. Traditional chinese medicine (TCM) combined with antibiotics is commonly used in clinical treatment of CBP, and polygonum capitatum (Pc) combined with ciprofloxacin (CIP) is effective in clinical treatment of CBP. However, the limited clinical promotion of drug combinations persists due to a rudimentary understanding of their underlying mechanisms. This study aims to reveal the potential synergistic mechanism of Pc and CIP to ameliorate CBP. Experimental Approach: CBP was induced by bilateral prostate injections of E. coli and treated with Pc and CIP. The therapeutic effect was evaluated, and transcriptome data analyzed via Ingenuity Pathway Analysis (IPA) to uncover molecular mechanisms. Tissue-thermal proteome profiling (Tissue-TPP) identified potential targets, and molecular docking predicted interactions between active compounds and key proteins. Key Results: Our findings demonstrated that Pc combined with CIP significantly improved CBP rats. RNA-Seq combined with IPA analysis showed that Pc combined with CIP significantly inhibited cytokine storm signaling pathway in CBP rats, especially the NF-κB/IL-6/JAK2/STAT3 pathway.Tissue-TPP identified Pik3cb as a direct target, with molecular docking showing gallic acid (GA) from Pc binding to Pik3cb. Additionally, GA combined with CIP also significantly improved CBP. Conclusion and Implications: The results indicate that Pc combined with CIP can mitigate CBP by targeting Pik3cb to inhibit NF-κB/IL-6/JAK2/STAT3 signaling pathway, and GA is the key active component in Pc.
Synergistic Effects of Micropatterned Substrates and Transforming Growth factor-β1 on...
Sakhavat Abolhasani
Davood Fattahi

Sakhavat Abolhasani

and 7 more

September 30, 2024
The functionality and structural integrity of the cardiovascular system profoundly depend on vascular smooth muscle cells (VSMCs). Human mesenchymal stem cells (hMSCs) have the potential to differentiate into VSMCs, which is promising for regenerative medicine and the production of vascular grafts. This study investigates the combined effect of micropatterned substrates and TGF-β1 on hMSC differentiation into VSMCs. After culturing hMSCs on both micropatterned and flat substrates for six days with or without TGF-β1 treatment, cell morphology and the expression of specific smooth muscle markers were assessed by immunofluorescence staining, RT-qPCR, and Western blotting. It was established that the hMSCs on micropatterned substrates with TGF-β1 promoted higher protein levels of smooth muscle myosin heavy chain (MYH11) than control hMSCs on flat substrates without TGF-β1(p-value < 0.001). Additionally, samples of micropatterned substrates with TGF-β1 treatment showed significantly enhanced expression of the MYH11 gene. Notably, hMSCs treated with TGF-β1 and cultured on flat substrates demonstrated even higher Cadherin-11 mRNA expression compared to cells cultured on both micropatterned and flat substrates without TGF-β1 (p-value < 0.05).. In addition, it was found that KLF4 protein was expressed at significantly higher levels in hMSCs seeded on the flat substrate without TGF-β1 treatment compare to those cultured on micropatterned substrate with TGF-β1 treatment (p-value < 0.001). Based on these observations, the study concludes that micropatterned substrates combined with TGF-β1 treatment preferentially promote the high expression of MYH11, representing an advanced state of smooth muscle cell organization. This combination also led to alterations in the level of KLF4 and up-regulation of cadherin-11 in the cells. This research offers valuable insights into MSC differentiation into VSMCs, potentially guiding the design of more effective vascular grafts that closely mimic native blood vessel properties. Significance: The incorporation of micropatterned substrates alongside TGF-β1 markedly improves the differentiation of hMSCs into VSMCs, revealing a synergistic interaction that refines cellular fate determinations. This investigation underscores the pivotal role of modulating KLF4 within the differentiation pathway, importance the importance of comprehension the fundamental molecular mechanisms to advance regenerative approaches. The integration of micropatterned substrates with TGF-β1 holds significant potential for enhancing tissue engineering endeavors focused on vascular regeneration, which may lead to better outcomes in the field of regenerative medicine.
Identifying longitudinal medication adherence patterns of antipsychotic treatments: A...
MARINA FUENTE-MORENO
Caitriona Cahir

MARINA FUENTE-MORENO

and 11 more

September 30, 2024
Introduction: Suboptimal adherence to antipsychotics leads to poorer outcomes and relapse. The adherence behaviour of people may be influenced by several factors including the number of antipsychotics used and their formulation. This study aimed to identify longitudinal adherence patterns to oral and long-acting injectable (LAI) antipsychotics in monotherapy or polypharmacy through group-based trajectory modelling (GBTM). Methods: This was a retrospective cohort study that linked prescription and dispensing data of adult patients with a new antipsychotic prescribed between 2015-2019 in Catalonia (Spain). GBTM was used to classify patients following a similar longitudinal pattern of adherence. The response variable was adherence, estimated through the continuous medication availability measure (CMA), in each 30-day period during 12 months of follow-up. Baseline and treatment characteristics were used to characterize the trajectories identified. Results: Among the 7,730 patients included in the study, we identified seven clinically distinct trajectory groups of adherence to antipsychotics: “non-adherent” (19%), “low adherent” (9%), “early-decline” (6%), “mid-decline” (5%), “late-decline” (5%), “high adherent” (21%), and “fully adherent” (35%). Trajectories with better adherence were more likely to receive the prescription from a psychiatrist, receive LAIs and have previous exposure to other antipsychotics. Intermittent medication use patterns and high levels of polypharmacy were characteristics of the “low” and “high adherent” groups. Conclusions: The trajectories reflect three adherence behaviours: stable over time; patients who discontinue treatment and; patients with an intermittent refill pattern. Patients on polypharmacy should have more regular adherence monitoring and LAIs should be considered, as they appear to be associated with better adherence.
AtALMT9 functions in regulating leaf senescence and plant resistance to diseases in A...
Hanshu Zhao
Yajing Song

Hanshu Zhao

and 3 more

September 30, 2024
To promote the growth of the agricultural economy, delaying plant aging and death while enhancing immune defense abilities can be beneficial. In this study, we focus on AtALMT9, which is located in the vacuolar membrane, and investigates its role in regulating leaf aging and plant disease resistance in Arabidopsis thaliana. We discovered that AtALMT9 negatively regulates leaf senescence and the immune response to pathogenic microorganisms through physiological analysis. The results of RNA-seq and qRT-PCR confirmed the leaf aging and immune-related genes were differentially expressed significantly in almt9 mutants. Furthermore, we found that the leaf senescence acceleration and disease resistance in almt9 mutants are due to the decreased contents of chlorophyll and malic acid as well as the increased levels of salicylic acid (SA) and jasmonate (JA). This study will provide insight into the molecular mechanism of AtALMT9 in regulating plant aging and disease resistance, and serve as a theoretical basis for enhancing agricultural productivity.
Hexagonal Boron Nitride as Qubit Material: A Comprehensive Review
Md Sadatuzzaman Saagoto

Md Sadatuzzaman Saagoto

and 4 more

September 10, 2025
Md Sadatuzzaman Saagoto *Lecturer, Department of Mechatronics Engineering, World University of Bangladesh, Uttara-17, Dhaka, BangladeshEmail: saagoto57@mte.wub.edu.bd* Correspondence: saagoto57@mte.wub.edu.bdORCID iD: 0009-0005-3857-301XRezwan-Us-SaleheenAssistant Professor, Department of Mechatronics Engineering, World University of Bangladesh, Uttara-17, Dhaka, BangladeshEmail: saleheen1@mte.wub.edu.bdMohammad Asif AhmedLecturer, Department of Mechatronics Engineering, World University of Bangladesh, Uttara-17, Dhaka, BangladeshEmail: asif.ahmed@mte.wub.edu.bdProtik BaruaLecturer, Department of Mechatronics Engineering, World University of Bangladesh, Uttara-17, Dhaka, BangladeshEmail: protik.barua@mte.wub.edu.bdFarhan MahbubAssociate Professor, Department of Mechatronics Engineering, World University of Bangladesh, Uttara-17, Dhaka, BangladeshEmail: mahbub3@mte.wub.edu.bd
Newborn Hypocalcemic Seizures Due To Maternal Hyperparathyroidism Review of the Liter...
Shatha Zabarqa
Isaac Lazar

Shatha Zabarqa

and 4 more

September 30, 2024
Newborns with seizures usually have identifiable seizure risk factors, including hypoxic-ischemic injury, intracranial hemorrhage, intracranial infection and metabolic disturbance. Hypocalcemia is a frequent and treatable cause of [neonatal seizures](https://www.sciencedirect.com/topics/medicine-and-dentistry/infantile-spasm), with numerous possible etiologies. Here, we present the case of two newborn infants with no apparent risk factors admitted to the pediatric emergency department with seizures due to hypocalcemia. Further investigations revealed maternal hyperparathyroidism caused by parathyroid adenoma.
In Vitro Antileishmanial Activity of Korean Red Ginseng Extract Against Two Leishmani...
Taddesse Yayeh
Alemu Tadesse Feroche

Taddesse Yayeh

and 1 more

September 30, 2024
Heightened parasite resistance urges the need for new therapeutic agents to treat diseases like leishmaniasis. Previously, extracts from ginseng exhibited antiprotozoal effects against malaria, trypanosomiasis, and leishmaniasis. In this study, we evaluated the antileishmanial activity of Korean red ginseng extract (KRGE) using the Alamar Blue assay on promastigotes and axenically cultured amastigotes from clinical isolates of Leishmania aethiopica and Leishmania donovani. Amphotericin B served as the positive control, while 1% dimethyl sulfoxide (DMSO) and the culture medium were used as negative controls. Our results indicated that KRGE has a significant dose-dependent inhibition with IC 50 values of 18.09 ± 1.64 and 17.22 ± 0.47 µg/ml for promastigotes, and 14.06 ± 0.09 and 15.45 ± 0.33 µg/ml for axenic amastigotes of L. aethiopica and L. donovani, respectively. Moreover, KRGE exhibited selectivity indices (SIs) of 3.18 and 3.34 for promastigotes, and 4.09 and 3.72 for amastigotes, whereas amphotericin B had SIs of 34.05 and 32.70 for promastigotes, and 32.15 and 31.28 for amastigotes. Altogether, KRGE possesses promising antileishmanial activity against L. aethiopica and L. donovani, warranting further investigation using active compounds isolated form Korean red ginseng.
Identification and Structure Elucidation of Novel Forced Degradation Products of Gime...
Raghuvirsinh Parmar
Sadhana Rajput

Raghuvirsinh Parmar

and 2 more

September 30, 2024
Rationale: The study aims to explore the degradation products of gimeracil via forced degradation analysis, necessitating the development of an analytical method for liquid chromatography mass spectrometry (LC-MS). Methods: Gimeracil was subjected to various stress conditions in accordance with International Conference on Harmonization guidelines, including acidic, alkaline, oxidative, photolytic, and thermal conditions. The analytical method was optimized to effectively separate gimeracil from its potential degradation products. Results: Under acidic, alkaline, photolytic, and thermal conditions, minimal degradation of gimeracil was observed. However, oxidative stress led to significant degradation, resulting in the identification of fourteen previously unreported degradation products. Structural elucidation of these products was achieved through orbitrap HRMS (High Resolution Mass Spectrometry) and HRMS/MS spectra analysis, with pathways for the formation of various daughter ions provided for some degradation products. Conclusion: Forced degradation analysis revealed the susceptibility of gimeracil to oxidative stress, leading to the generation of numerous degradation products. The developed LC-MS method proved effective in separating gimeracil from its degradation products, enabling comprehensive structural elucidation and identification.
Effects of acute restraint stress on social choice: Implications of oxytocin and fear...
Sheng-Chiang Wang
Chen-Cheng Lin

Sheng-Chiang Wang

and 3 more

September 30, 2024
In modern society, stress is considered a crucial determinant to influence various aspects of individuals’ life, including sociability, in which the role of oxytocin has been recognized to benefit social bonding or provides a buffering effect. However, the relationship between stress-induced fear and oxytocin-associated social behavior is not clear, particularly when individual encounters situation with similar context of the stressful event. The present study targeted at this issue by examining whether acute restraint stress (ARS) may change the profiles of anxiety (indexed by elevated T maze, ETM) and prosocial behavior (indexed by social choice test, SCT), and were these ARS effects can be adjusted by the pharmacological intervention of L-368899, an oxytocin antagonist and antalarmin, a corticotropin-releasing hormone (CRH) receptor antagonist. Peripheral corticosterone and the tissue levels of serotonin (5-HT), dopamine (DA), and norepinephrine (NE) in hippocampus, medial prefrontal cortex (mPFC), and amygdala were measured to manifest rats’ anxiety tone and the disturbance of monoaminergic neural substrates in fear circuit. Our results showed that: (i) ARS rats more frequently chose the chamber with prosocial opportunity, and L-368899 and antalarmin were found to undo this effect. (ii) ARS rats were found to have a lower DA but higher NE levels in mPFC, both can be reversed by L-368899. (iii) ARS rats were found to have a lower level of corticosterone, together with shorter avoidance latency and longer escape latency of ETM. Our results may contribute to the understanding of stress-related sociability and the context-dependent role of oxytocin.
The SIX Cs Model Integrating Empathy: Optimizing Psychological First Aid for Children...
M. Farchi
T. Shlesinger

M. Farchi

and 1 more

September 30, 2024
This study explores the integration of empathy into the SIX Cs Model of psychological first aid (PFA) through a case study intervention during a terrorist attack in Israel. Empathy, a multifaceted concept involving the ability to share, understand, and reflect on others’ emotions, is essential in trauma interventions. Various approaches to empathy, including active listening, emotional empathy, cognitive empathy, and compassionate empathy, uniquely contribute to psychological interventions. The SIX Cs Model—comprising Cognitive Communication, Challenge, Control, Commitment, and Continuity—focuses on reducing acute stress reactions by activating the prefrontal cortex and regulating the amygdala. This model emphasizes the need to regulate the sympathetic nervous system activity thereby achieving physiological balance. This case study demonstrates the vital importance of integrating empathy within structured models like the SIX Cs Model to optimize trauma response and recovery. The neuropsychological aspects of empathy and the SIX Cs Model, including the regulation of cortisol levels and the enhancement of dopamine release, are crucial in managing acute trauma. This case exemplifies how the application of empathy within structured PFA models can lead to life-saving outcomes. Ultimately, the intervention resulted in the optimal outcome of saving the lives of two children, highlighting the profound impact and necessity of this approach in crisis situations.
RSEA: a web server for pathway enrichment analysis of metabolic reaction sets
Merve Yarıcı
Furkan Cantürk

Merve Yarıcı

and 4 more

September 30, 2024
Changes in biological pathways provide essential clues about metabolism. Genome-scale metabolic Models (GEM) are network-based templates that computationally describe all stoichiometric associations and gene-protein reaction (GPR) relations found in an organism for all its metabolic genes and metabolites. Using reaction stoichiometry as input, GEMs mathematically simulate metabolic reaction fluxes occurring in an organism and predict changes in the metabolic system under the relevant condition. Multiple tools and approaches in the literature can capture fluxes sensitive to a given condition by using GEMs. However, functional enrichment analysis of these reaction lists in a systems biology perspective is not straightforward. Here, we introduce RSEA to annotate given reaction sets to significantly related metabolic pathways: Reaction Set Enrichment Analysis web server tool. RSEA converts given reaction list derived from GEMs into proper reaction identifiers and statistically analyze its enrichment in metabolic pathways. RSEA is designed to provide researchers with a practical and user-friendly platform to explore and interpret sets of reactions in biological pathways and freely available online (https://rseatool.com/).
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