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Genomic analysis of a reef-building coral, Acropora digitifera, reveals complex popul...
Kojin Tsuchiya
Yuna Zayasu

Kojin Tsuchiya

and 6 more

December 12, 2021
Understanding the structure and connectivity of coral populations is fundamental for developing marine conservation policies, especially in patchy environments such as archipelagos. The Nansei Islands, extending more than 1,000 km in southwestern Japan, are characterized by high levels of biodiversity and endemism, supported by coral reefs, although precise, detailed genetic attributes of corals are still largely unknown. In this study, we conducted population genomic analyses based on genome-wide, single-nucleotide polymorphisms (SNPs) of Acropora digitifera, a common species in the Nansei Islands, for which a complete genome is available. With ~24x sequencing coverage of entire genomes of 303 colonies collected at 21 locations, we identified more than four million genome-wide SNPs. While population structure analyses suggested weak genetic differentiation among sampled locations, the most southwestern location (the west end of the Yaeyama Islands) was genetically similar to the northernmost location (the Tanegashima Islands), separated by >1,000 km. Although examination of a migration network found a general tendency of northward migration along the Kuroshio Current, a substantial amount of southward migration was also detected, indicating important contributions of minor ocean currents to coral larval dispersal. Moreover, heterogeneity in the transition of effective population sizes among locations suggests different histories for individual subpopulations. The unexpected complexity of both past and present population dynamics in the Nansei Islands implies that heterogeneity of ocean currents and local environments, past and present, have influenced the population structure of this species, highlighting the importance of local scale assessments for effective coral restoration and management.
Patterns of contraceptive use among Australian women of reproductive age with chronic...
Melissa Harris
Nicholas Egan

Melissa Harris

and 4 more

December 12, 2021
Objective: Examine patterns of contraceptive use among reproductive age women, with and without chronic disease, and investigate factors which influence contraceptive use over time. Design: Population-based cohort study Setting and population: Data from 8,030 women from the Australian Longitudinal Study on Women’s Health. Main outcome measures: Contraceptive patterns identified using latent transition analysis. Methods: Multinomial mixed-effect models were used to evaluate the relationship between contraceptive combinations and chronic disease. Results: Women with chronic disease used contraception at similar rates to women without chronic disease however contraceptive non-use increased over the observation period (13.6% vs 12.7% in 2018 when aged 40-45 years). When specific contraceptive use patterns were examined over time, differences were found for women with autoinflammatory diseases only. Compared to women without chronic disease using the pill and condoms, women with autoinflammatory disease had increased odds of using condom and natural methods (OR=1.20, 95% CI=1.00, 1.44), and sterilisation and other methods (OR=1.61, 95% CI=1.08, 2.39) or no contraception (OR=1.32, 95% CI=1.04, 1.66), compared to women without chronic disease using short-acting methods and condoms. Conclusion: Potential gaps in the provision of appropriate contraceptive access and care exist for women with chronic disease, particularly those diagnosed with autoinflammatory conditions. Development of national guidelines as well as a clear coordinated contraceptive strategy from adolescence through to the mid reproductive years and perimenopause encouraging regular contraceptive review during care management to increase support for, and agency among, women with chronic disease is required.
The clinical cross-reactivity and immunological cross-antigenicity of wheat and barle...
Shohei Kubota
Yuji Aoki

Shohei Kubota

and 9 more

December 12, 2021
Background: Some patients with a wheat allergy have been reported to show clinical cross-reactivity to barley. However, it is not clear whether the development of barley allergy in patients with a wheat allergy is due to cross-antigenicity between wheat and barley. In our study, we aimed to determine the clinical cross-reactivity and immunological cross-antigenicity of wheat and barley. Methods: We compared the results of barley oral food challenges (OFCs) before oral immunotherapy (OIT) for wheat with those after OIT in nine patients with a wheat allergy to estimate the clinical cross-reactivity of wheat and barley. Moreover, we performed enzyme-linked immunosorbent assay (ELISA) inhibition and immunoblotting inhibition using serum from seven patients allergic to wheat and barley. Results: Nine patients who had positive barley-OFC results performed before OIT for wheat were all negative on barley-OFC performed after OIT. In ELISA inhibition, preincubation of serum from patients allergic to wheat and barley with a high barley extract concentration inhibited binding of IgE to wheat extract by less than 10%. On the other hand, wheat and barley extracts equally inhibited binding to barley sIgE at high concentrations. In the immunoblotting inhibition test, the spots of wheat were inhibited but weakly by barley extracts, and most of the spots of barley were inhibited even by low concentrations of the wheat and barley extract. Conclusion: We showed that barley allergy associated with wheat allergy is caused by cross-reactivity from wheat. The OIT for wheat was one of the promising options for barley allergy.
Characterizing membrane anchoring of leaf-form ferredoxin-NADP+ oxidoreductase in ric...
xiaowen da
jiangfan guo

xiaowen da

and 11 more

December 12, 2021
Leaf-form ferredoxin-NADP+ oxidoreductases (LFNRs) function in the last step of the photosynthetic electron transport chain, exist as soluble proteins in the chloroplast stroma, and are weakly associated with thylakoids or tightly anchored to chloroplast membranes. Arabidopsis thaliana has two LFNRs, and the chloroplast proteins AtTROL (THYLAKOID RHODANESE-LIKE PROTEIN) and AtTIC62 (62-kDa SUBUNIT OF TRANSLOCON OF INNER CHLOROPLAST MEMBRANE) participate in anchoring AtLFNRs to the thylakoid membrane. By contrast, the membrane anchoring mechanism of rice (Oryza sativa) LFNRs has not been elucidated. Here, we investigated the membrane-anchoring mechanism of LFNRs and its physiological roles in rice. We characterized the rice protein OsTROL1 based on its homology to AtTROL and showed that OsTROL1 is also a thylakoid membrane anchor and its loss led to a compensatory increase in OsTIC62. Moreover, OsLFNR1 attachment through a membrane anchor depends on OsLFNR2, unlike their Arabidopsis counterparts. In addition, OsTIC62 was more highly expressed in rice under dark than under light conditions, consistent with the increased membrane binding of OsLFNR in the dark. Moreover, we observed reciprocal stabilization between OsLFNRs and their membrane anchors. Therefore, our study sheds light on the mechanisms anchoring LFNRs to membranes in rice and highlights differences with Arabidopsis
Impact of Pharmacy Services on Time to Elexacaftor-Tezacaftor-Ivacaftor Initiation
Lauren Roder
Michelle Simonsen

Lauren Roder

and 4 more

December 12, 2021
The approval of elexacaftor-tezacaftor-ivacaftor (ELX/TEZ/IVA) expanded highly effective cystic fibrosis transmembrane receptor modulator therapy to approximately 90% of persons age 12 and older with cystic fibrosis. Clinical pharmacists and pharmacy technicians played a key role in planning for ELX/TEZ/IVA initiation prior to FDA approval as well as initiating therapy after approval. This study evaluates the impact of pharmacy services on time to ELX/TEZ/IVA initiation. A retrospective chart review evaluated patients qualifying for ELX/TEZ/IVA at a single health system between October 21, 2019 and April 1, 2020. Patients filling ELX/TEZ/IVA at an integrated health system specialty pharmacy (HSSP) versus an outside specialty pharmacy (SP) started on therapy an average of 10.8 days faster (10.8 days ± 14.0 vs 21.6 days ± 18.8 respectively; p=0.006). More patients filling at a HSSP received ELX/TEZ/IVA within 14 days of the prescription being written compared to outside SPs (82.0% vs 41.4% respectively; p=0.001). Pre-ELX/TEZ/IVA initiation, patients were hospitalized for a CF related complication for an average of 6.26 days (range 0-183) compared to 1.16 days (range 0-91) post-ELX/TEZ/IVA initiation. Lastly, an estimated $134,810 was saved in the 105 patients that were able to fill ELX/TEZ/IVA at a HSSP by initiating drug an average of 10.8 days quicker than outside SPs. The results of this study demonstrate the value of an integrated HSSP model. Further advocacy for inclusion of integrated HSSPs by pharmacy benefit managers is needed to optimize medication access, control costs, and improve patient outcomes for patients receiving care within a health system.
Not all traits are functional: the Panglossian paradigm
Rob Salguero-Gómez

Rob Salguero-Gómez

and 1 more

December 13, 2021
The popularity of trait-based approaches continues to rise despite challenges in identifying strong links between traits and organism performance. Here, we summarise evidence demonstrating that not all traits appear to be functional, and discuss how life history theory and demography can help elucidate which, how, where, and when traits gain functionality
Control of fatigue failure mechanisms in multilayer coatings by varying the architect...
Songsong Lu
Richard Cook

Songsong Lu

and 3 more

December 12, 2021
A multilayer overlay coating system containing an intermediate intermetallic layer (designated 2IML) is an architecture expected to show good fatigue resistance. Experimental characterisation and modelling simulations were carried out to classify the different crack initiation mechanisms occurring during fatigue of this coating system and to reveal how changes in the layer architecture lead to fatigue improvement. Fatigue improvement is achieved by decreasing the IML-Top layer thickness due to the increased surface crack initiation resistance. However subsurface initiation mechanisms inhibit the improvement (dominated by surface initiation mechanism) achieved by locating the IML-Top layer closer to the top surface.
Patients with monogenic immune dysregulation show improvement in childhood interstiti...
Holly Wobma
Ryan Perkins

Holly Wobma

and 13 more

December 12, 2021
In recent years, a number of monogenic disorders have been described that are characterized by immune dysregulation. A subset of these ‘primary immune regulatory disorders’ can cause severe interstitial lung disease, often recognized in late childhood or adolescence. Patients presenting to pulmonary clinic may have long and complex medical histories but lack a unifying genetic diagnosis. It is crucial for pulmonologists to recognize features suggestive of multisystem immune dysregulation and to initiate genetic workup, since targeted therapies based on underlying genetics may halt or even reverese pulmonary disease progression. Through such an approach, our center has been able to diagnose and treat a cohort of patients with interstitial lung disease from gene defects that affect immune regulation. Here we present representative cases related to pathogenic mutations in three distinct pathways and summarize disease manifestations and treatment approaches. We conclude with a discussion of our perspective on the outstanding challenges for diagnosing and managing these complex life-threatening and chronic disorders.
A case of atypical disseminated herpes zoster in a patient with COVID-19; a diagnosti...
fatemeh mohaghegh
Parvaneh Hatami

fatemeh mohaghegh

and 2 more

December 12, 2021
The rare disseminated form of Herpes Zoster occurred mainly in immunocompromised patients. We hereby, present the first case of atypical disseminated herpes zoster in a 54-year old woman admitted with serious COVID. This case serves as a reminder for considering atypical presentations of cutaneous disorders in immunocompromised patients.
Decitabine combined regimen in the therapy of Blastic plasmacytoid dendritic cell neo...
Jun Guan
Ying Zhou

Jun Guan

and 4 more

December 12, 2021
We enrolled a patient diagnosed with blastic plasmacytoid dendritic cell neoplasm (BPDCN) . We have found that TET2, KRAS and BRAF may be involved in the development of the disease, and the combination therapy of Decitabine (DAC) and Arsenic acid (ASO) may be effective for BPDCN harboring the TET2 mutations.
Antioxidant Activity of Amino Acid Sodium and Potassium Salts in Vegetable Oils at Fr...
Hong-Sik Hwang
Jill Winkler-Moser

Hong-Sik Hwang

and 2 more

December 11, 2021
Previous studies reported that several amino acids had strong antioxidant activity in vegetable oils under frying conditions. In this study, the carboxylic acid group of amino acids was converted to a carboxylate group (-COO-Na+ or -COO-K+), a heating study was conducted with amino acid salts in soybean oil at 180 ºC. Sodium salts of amino acids including alanine, phenylalanine, and proline and disodium glutamate had significantly stronger antioxidant activity than the corresponding amino acids, and potassium salts had stronger antioxidant activity than sodium salts. Potassium salts of alanine and phenylalanine more effectively retained tocopherols in soybean oil than the corresponding amino acids during heating. Phenylalanine potassium salt had stronger antioxidant activity than phenylalanine in other vegetable oils including olive, high oleic soybean, canola, avocado, and corn oils. Phenylalanine potassium salt at 5.5. mM more effectively prevented oil oxidation than tert-butyl hydroquinone (TBHQ), a synthetic antioxidant, at its legal concentration limit (0.02%) indicating its feasibility as a new antioxidant for frying.
Smac/DIABLO can predict postoperative delirium in elderly patients after cardiac surg...
Xin Ding
Zeping Li

Xin Ding

and 4 more

December 11, 2021
Background:Postoperative delirium (POD) is a common complication following cardiac surgery. Mitochondrial injury, demonstrated by excessively activated oxidative stress and regulating cell apoptosis, has been reported to contribute to POD. [Mitophagy](https://www.geenmedical.com/article?id=34752757&type=true), apoptosis, pyroptosis, ferroptosis had been known to play a critical role in degenerative nervous system diseases. However, the serum change of Smac/DIABLO in POD induced by cardiac surgery/anesthesia is still undetermined. We designed the study to determine the expression level of SMAC/DIABLO in POD patients. Methods:A nested case-control study was performed, including 21 POD patients and a matched group of 63 non-POD controls.
On a general degenerate/singular parabolic equation with a nonlocal space term
Brahim Allal
Genni Fragnelli

Brahim Allal

and 2 more

December 11, 2021
In this paper we study the null controllability for the problems associated to the operators y_t-Ay - \lambda/b(x) y+\int_0^1 K(t,x,\tau)y(t, \tau) d\tau, (t,x) \in (0,T)\times (0,1) where Ay := ay_{xx} or Ay := (ay_x)_x and the functions a and b degenerate at an interior point x0 Ë .0; 1/. To this aim, as a first step we study the well posedness, the Carleman estimates and the null controllability for the associated nonhomogeneous degenerate and singular heat equations. Then,using the Kakutani’s fixed point Theorem, we deduce the null controllability property for the initial nonlocal problems.
Plastics degradation by hydrolytic enzymes: the Plastics-Active Enzymes Database - PA...
Patrick  Buchholz
Hongli Zhang

Patrick Buchholz

and 6 more

December 11, 2021
Petroleum based plastics are durable and accumulate in all ecological niches. Knowledge on enzymatic degradation is sparse. Today, less than 50 verified plastics-active enzymes are known. First examples of enzymes acting on the polymers polyethylene terephthalate (PET) and polyurethane (PUR) have been reported together with a detailed biochemical and structural description. Further, very few polyamide (PA) oligomer active enzymes are known. In this paper, the current known enzymes acting on the synthetic polymers PET and PUR are briefly summarized, their published activity data were collected and integrated into a comprehensive open access database. The Plastics-Active Enzymes Database (PAZy) represents an inventory of known and experimentally verified plastics-active enzymes. Almost 3000 homologues of PET-active enzymes were identified by profile hidden Markov models. Over 2000 homologues of PUR-active enzymes were identified by BLAST. Based on multiple sequence alignments, conservation analysis identified the most conserved amino acids, and sequence motifs for PET- and PUR-active enzymes were derived.
Impact of seasonality on helminthic infections
Satesh Kumar

Satesh Kumar

December 21, 2021
CorrespondenceSatesh Kumar, 4th year MBBS student, Shaheed Mohtarma Benazir Bhutto Medical College Liyari, Karachi Address: Parsa citi Block E Floor 5th , Flat 501 near police headquarter, Garden east Karachi. Contact: +92-3325252902 Email: Kewlanisatish@gmail.com
Quasilinear Choquard equations involving N-Laplacian and critical exponential nonline...
sreenadh
Sarika Goyal

sreenadh konijeti

and 2 more

December 11, 2021
In the present paper, we study a class of quasilinear Choquard equations involving N-Laplacian and the nonlinearity with the critical exponential growth. We discuss the existence of positive solutions of such equations.
Severe Posterior Infra-occlusion on a Young Girl Posing a Diagnostic Challenge- Revie...
Mirna George
Lana Dalbah

Mirna Awad

and 4 more

December 11, 2021
Primary failure of eruption is characterized by a non-syndromic eruption failure of permanent teeth in the absence of any mechanical obstruction. Applying orthodontic traction to teeth affected by PFE will not be successful and may cause ankylosis. This correspondence reviews and demonstrates the treatment of a case of PFE.
Clinical Implications of Airway Anomalies and Stenosis in Patients with Heterotaxy Sy...
Mei-Hwan Wu
Ching-Chia Wang

Mei-Hwan Wu

and 4 more

December 10, 2021
In heterotaxy syndrome, bronchopulmonary situs usually reflects atrial situs, resulting in either right (RAI) or left atrial isomerism (LAI). This study determines airway anomalies and its implications in patients with heterotaxy. This retrospective study included 223 patients with heterotaxy syndrome who received an integrated cardiac computed tomography evaluation. Patient database from 1995 to 2020 was reviewed. The patients were examined by a congenital heart disease team comprising pediatric cardiologists, radiologists, pulmonologists, and cardiovascular surgeons. Among the 223 patients, 189 (84.8%, M/F=1.66) had RAI and 29 had LAI (13.0%, M/F=0.71). Five patients had indeterminate isomerism (2.2%, M/F=1.5). Discordant bronchopulmonary and atrial situs occurred in 4% patients, while discordant bronchopulmonary, atrial, and splenic situs occurred in 23.2% patients. Lower airway stenosis was observed in 61 patients (27.4%), including 27.5%, 20.7%, and 60% RAI, LAI, and indeterminate isomerism patients, respectively (p=0.189). One patient had an intrinsic long segment lower tracheal stenosis and received slide tracheoplasty. Initial cardiac operation was performed in 213 patients. Higher surgical mortality occurred in patients with RAI (19.5% vs. none for LAI and indeterminate isomerism, p=0.038). In patients with RAI, lower airway anomaly/stenosis increased the duration of ventilator usage (p=0.030) but did not affect surgical mortality. Total anomalous pulmonary venous return to systemic veins and pulmonary venous stenosis were major surgical risk factors. Bronchopulmonary isomerism shares a similar isomeric pattern to cardiac atrial appendage. Lower airway anomalies/stenosis was common in patients with heterotaxy, resulting in prolonged ventilator therapy in patients with RAI.
Existence result for critical Klein-Gordon-Maxwell system involving steep potential w...
Canlin Gan

Canlin Gan

and 1 more

December 10, 2021
A document by Canlin Gan. Click on the document to view its contents.
Matrix methods for perfect signal recovery underlying range space of operators
Fahimeh Arabyani Neyshaburi
Ramin Farshchian

Fahimeh Arabyani Neyshaburi

and 2 more

December 10, 2021
The purpose of this work is to investigate perfect reconstruction underlying range space of operators in finite dimensional Hilbert spaces by a new matrix method. To this end, first we obtain more structures of the canonical $K$-dual. % and survey optimal $K$-dual problem under probabilistic erasures. Then, we survey the problem of recovering and robustness of signals when the erasure set satisfies the minimal redundancy condition or the $K$-frame is maximal robust. Furthermore, we show that the error rate is reduced under erasures if the $K$-frame is of uniform excess. Toward the protection of encoding frame (K-dual) against erasures, we introduce a new concept so called $(r,k)$-matrix to recover lost data and solve the perfect recovery problem via matrix equations. Moreover, we discuss the existence of such matrices by using minimal redundancy condition on decoding frames for operators. We exhibit several examples that illustrate the advantage of using the new matrix method with respect to the previous approaches in existence construction. And finally, we provide the numerical results to confirm the main results in the case noise-free and test sensitivity of the method with respect to noise.
Personalized medicine: the  future of Modern Medicine
Dr Pravin Badhe

Dr Pravin Badhe

and 2 more

December 13, 2021
Medical care is no longer a one-size-fits-all endeavour. There is a problem with the traditional or present systems of medical care because they were developed and tested on large groups of people. Consequently, the prescriptions prescribed are not suitable for every person. A certain number of medicines work very well for some people and some do not. Modern medicine relies on scientific evidence, including clinical trials, which is termed evidence-Based Medicine. It is expected that in the future, treatment will be based on algorithms that will take the patient’s genetic, epigenetic, and lifestyle characteristics into account, resulting in personalized medication.The drugs that your doctor recommends for you will be determined by your genetics, lifestyle, and environment, along with your symptoms of illness. Modern medicine has enabled humans to live longer and healthier lives.Personalized medicine is the way of thinking about medicine in the modern era. We will examine how personalized medicine will change healthcare, how artificial intelligence and personalised medicine can be combined to improve healthcare, the role of personalized medicine in pharmaceuticals, its application, and its future trajectory.
Neighbors consistently influence growth and survival in a frequently burned savanna
Mark Davis
Richard Condit

Mark Davis

and 1 more

December 10, 2021
Successful management of savannas is challenging and requires knowledge of the causes and consequences of the spatial arrangement of the trees. In savannas, trees are often aggregated, and the ability of trees within the clumps to survive fires plays a significant role in determining the savannas landscape dynamics. Whether or not a tree survives a fire is often dependent on the nature of their interactions with neighboring trees, positive or negative. In cases where disturbances are episodic, detecting these interactions is only going to be possible through long-term studies. Data reported here, from twenty-five years of annual tree censusing of a large grid-plot in a frequently burned savanna, showed consistent neighbor facilitated survival, irrespective as to whether the neighbors were conspecifics or heterospecifics. The positive interactions likely involve the reduction of both herbaceous and woody fuel in denser sites, and possibly mycorrhizal sharing among nearby trees.
Structures of intransitive competition network affect functional attributes of plant...
Qingqing Sun
Junjie Yang

Qingqing Sun

and 7 more

December 10, 2021
Atmospheric nitrogen (N) deposition is a potential danger factor for grassland ecology, and will cause unpredictable consequences to plant communities. However, how plant species interactions response to N enrichment and then affect ecological functions are not fully known. We investigated how intransitive competition network was related to the functional attributes of plant community under a 13-years N-deposition experiment. Results showed that intransitive competition network was not a single structure, but a complexly interwoven structure of various simple structures. Nested work was more common, accounting for 76.96%, and gained new species at a higher colonization rate than short network did. The network had a long-term mechanism to maintain the small-scale Alpha diversity, and a significant lag effect on the large-scale Gamma diversity. Under the conditions of N ≥ 2 g N·m-2·year-1, without mowing and under high fertilization frequency, the increase of network complexity significantly decreased plot biomass gradually. The relationship between biomass and network complexity is quadratic curves, also between abundancy and the complexity, but with the opposite bending directions, which indicated that biomass and abundance were complementary to each other, which may be a mechanism of maintaining the relative balance of species competition. In addition, the decrease of species asynchronism changing with the increase of N-enrichment gradually destroyed ecosystem stability. However, at medium N enrichment, intransitive network counteracted the negative effects of N enrichment and maintained or even improved the biomass ecosystem stability. Our results suggested that intransitive competition network is an internal mechanism of self-restoration of a grassland ecosystem. Under nitrogen enrichment conditions, competitive networks complexity is reduced, leading to a reduction in species diversity. These analyses emphasize the important role of intransitive network structure to stabilize grassland ecosystem. In order to achieve sustainable development of grassland, it is indispensable to control nitrogen addition rate.
The anti-inflammatory feature of glucagon-like peptide-1 and its based diabetes drugs...
Juan Pang
Jia Nuo Feng

Juan Pang

and 3 more

December 10, 2021
Since 2005, GLP-1 receptor (GLP-1R) agonists (GLP-1RAs) have been developed as therapeutic agents for Type 2 diabetes. GLP-1R is not only expressed in pancreatic islets but also in other organs, especially the lung. Extra-pancreatic expression of GLP-1R triggered intensive investigations on extra-pancreatic functions of GLP-1RAs, aiming to repurpose them into therapeutic agents for other disorders. Intensive studies have demonstrated promising anti-inflammatory features of GLP-1RAs. Whether those features are directly mediated by GLP-1R expressed in majority of immune cells remains controversial. Following a brief review on GLP-1 as incretin and the development of GLP-1RAs as therapeutic agents, we summarized our current understanding on anti-inflammatory features of GLP-1RAs. The main part of this review is literature discussions on GLP-1RA utilization in chronic and acute lung injuries, including studies on combined use of MSC-based therapy and the GLP-1RA liraglutide in LPS-induced acute lung injury. This is followed by a summary and perspective.
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