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Explore 66,105 preprints on the Authorea Preprint Repository

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Energy Efficiency Enhancement in UAV Communication Systems
Deepa
* ASivasamy

* *

and 1 more

October 27, 2023
The research paper focuses on enhancing energy efficiency in Unmanned Aerial Vehicle (UAV) communication systems. It aims to address the challenges posed by limited battery capacity and the critical need for reliable and sustainable communication in UAV operations. The study employs innovative methodologies, including adaptive modulation, transmission power control, error correction coding, and cooperative communication, to optimize data transmission and reception. Through extensive simulations and experiments, the research quantifies the benefits of these strategies in terms of reduced energy consumption, improved communication reliability, and extended mission durations. The findings underscore the significance of energy-efficient UAV communication for diverse applications, from agriculture to disaster response. The study contributes to the advancement of UAV technology, fostering more efficient and environmentally conscious operations in the realm of aerial robotics.
Deinococcus wulumuqiensis R12 synthesized silver nanoparticles with peroxidase-like a...
Jingjia Liu
Nan Zhang

Jingjia Liu

and 6 more

October 27, 2023
The use of a combination of several antibacterial agents for therapy holds great promise in reducing the dosage and side effects of these agents, improving their efficiency, and inducing potential synergistic therapeutic effects. Herein, R12-AgNPs were produced with the supernatant of an ionizing radiation-tolerant bacterium Deinococcus wulumuqiensis R12 by one-step under room temperature. The biosynthesized AgNPs presented fascinating antibacterial activity and peroxidase-like properties, which endowed it with the capability to catalyse the decomposition of H2O2 to generate hydroxyl radical. After combination of R12-AgNPs and H2O2, an excellent synergistic bacteriostatic activity was observed for both E. coli and S. aureus, especially at low concentrations. In addition, in vitro cytotoxicity tests showed R12-AgNPs had good biocompatibility. Thus, this work presents a novel antibacterial agent that exhibits favorable synergistic antibacterial activity and low toxicity, without the use of antibiotics or a complicated synthesis process.
Development of a Rule-Based Expert System for Cost and Gross Profit Calculations of A...
Fatih Topaloğlu

XXX

October 27, 2023
Development of a Rule-Based Expert System for Cost and Gross Profit Calculations of Agricultural Products: Apricot Information System (APRIS) ApplicationOğuz Şahin1 | Fatih Topaloğlu21Apricot Research Institute Directorate, Malatya, Turkey2 Department of Computer Engineering, Malatya Turgut Özal University, Malatya, TurkeyCorrespondenceFatih Topaloğlu, Department of Computer Engineering, Malatya Turgut Özal University, Malatya, TurkeyEMail:fatih.topaloglu@ozal.edu.tr
Automatic monitoring of drug associated muscle adverse reaction in 102430 inpatients
Anqi Zhao
Daihong Guo

Anqi Zhao

and 5 more

October 27, 2023
OBJECTIVE: To analyze clinical characteristics, incidence, and distribution of drug associated muscle adverse reaction (DAMAR) in real world inpatients, to provide references for clinical medication use. METHODS: Automated retrospective monitored inpatients from 2022-5-1 to 2023-4-30 to obtain information about patients’ adverse reactions and analyze. RESULTS: There were 1106 DAMARs among 102430 hospitalizations, with an incidence of 1.08%, in which 125 cases of rhabdomyolysis with an incidence of 0.12%. 75% of the patients experienced muscle adverse reactions within 5 days after medication, and the median value of elevated CK was 420.4 IU/L. There was no significant correlation between duration of surgery and the elevation of CK, while the surgical procedure had an effect. Age, male sex, obesity, hypertension, hepatic and renal insufficiency, anemia, and other underlying diseases were risk factors. The 114 drugs involved were mainly nervous system drugs, antiinfectives for systemic use and cardiovascular system drugs, with levofloxacin, pregabalin and parecoxib being the drugs with the highest number of cases. CONCLUSION: Attention should be paid to patients with the above risk factors. Monitor creatine kinase and related indexes when using myotoxic drugs, to avoid the occurrence of serious adverse reactions, which may affect the patients’ quality of life.
The discovery of ergothioneine biosynthesis genes from Pleurotus eryngii and its comb...
Jun-Fang Lin
Liqiong Guo

Jun-Fang Lin

and 8 more

October 27, 2023
Ergothioneine (EGT) is a natural amino acid derived from histidine, which has many active functions such as anti-oxidation, anti-inflammation, anti-cancer and prevention of neurodegenerative diseases. Pleurotus eryngii is a delicious edible fungus with high EGT content. The purpose of this study was to explore the synthesis mechanism of EGT in P. eryngii and realize heterologous expressio of EGT in Saccharomyces cerevisiae. The EGT synthase genes in P. eryngii were discovered by bioinformatics method, and four synthase genes were obtained: PeEgt1, PeEgt2a, PeEgt2b and PeEgt2c, which were heterologously expressed in S. cerevisiae IMX581 for functional identification. Single-, double- and triple-gene heterologous expression strains were constructed, and the results showed that S. cerevisiae could synthesize EGT only by integrating PeEgt1; then integrating PeEgt2a or PeEgt2b on this basis could significantly increase EGT production, while integrating PeEgt2c did not increase EGT production. The yield of EGT of MX581-PeEgt1-2a-2b was not significantly higher than that of the double-gene engineered strains, suggesting that the low enzyme activity of PeEgt1 led to the accumulation of S-adenosylmethionine or hercynine, which might be the key rate-limiting step. The EGT synthase genes in P. eryngii were mined and successfully heterologously expressed in S. cerevisiae, and the synthesis pathway of EGT in P. eryngii was speculated. The results of this study enrich the resource pool of EGT synthetic genes, and provide ideas for the construction of engineered strains with high EGT expression.
Preserved auditory salience processing after chemogenetic inhibition of the locus coe...
Anna Kabanova
Mingyu Yang

Anna Kabanova

and 3 more

October 27, 2023
The acoustic startle reflex (ASR) and prepulse inhibition of the ASR (PPI) assess the efficiency of salience processing, a fundamental brain function that is impaired in many psychiatric conditions. Both ASR and PPI depend on noradrenergic transmission, yet the modulatory role of the Locus Coeruleus (LC) remains controversial. In the present study, we compared the effects of chemogenetic and pharmacological suppression of noradrenergic transmission on the ASR and PPI in wild-type adult male rats. Clonidine (0.05 mg/kg, i.p.), an alpha2-adrenoreceptor agonist, strongly reduced the ASR amplitude. We confirmed a high cell-type specificity (94.4 ± 3.1%) of the canine adenovirus type 2 (CAV2)-based vector carrying a gene cassette for expression of inhibitory designer receptors (hM4Di) and noradrenergic cell-specific promoter (PRSx8). Clozapine-N-Oxide (CNO; 1 mg/kg, i.p), a hM4Di actuator, caused the firing cessation of hM4Di-expressing LC neurons but did not affect the ASR. A case-based immunohistochemistry revealed heterogeneous virus transduction of DbH-positive LC neurons (range: 9.2 – 94.4%). The virus injections distal (> 150µm) to the LC core resulted in partial LC transduction, while proximal (< 50µm) injections caused neuronal loss due to virus neurotoxicity. Overall, complete inhibition of the entire population of LC neurons was rarely achieved; therefore, the activity of virus-unaffected LC neurons might have been sufficient for mediating an unaltered behavioral response to startling sounds. Our results highlight the importance of a case-based assessment of the efficiency of virus transduction for targeted cell populations and consider it when interpreting behavioral effects in experiments employing chemogenetic modulation.
Non−Invasive Urinary Metabolomic Study for the Diagnostic Biomarkers Discovery of Col...
Feng Qi
Yulin Sun

Feng Qi

and 14 more

October 27, 2023
Background: Colorectal cancer (CRC) ranks as the third most prevalent malignancy globally, presenting a formidable early diagnostic challenge. An effective biomarker with high sensitivity and specificity can help diagnose CRC and improve the chances of successful treatment. Methods: 100 healthy controls and 95 CRC patients( 25 Stage 0/I,30 stage II and 40 stage III based on Clinical stages) were recruited. Subsequently, 195 urine samples were subjected to UPLC-MS analysis. Comparative analysis was employed to elucidate noteworthy metabolic variances, and pathway analysis was conducted to unveil perturbed metabolic functions. Ultimately, metabolic panels for CRC diagnosis were constructed. Result: A total of 82 metabolites exhibited statistical significance between CRC patients and healthy controls. Moreover, pathway analysis revealed that they were associated with Steroid hormone biosynthesis, Nitrogen metabolism, and D-Glutamine and D-glutamate metabolism. A composite panel consisting of Retinol, L-β-aspartyl-L-glycine and 21-Deoxycortisol showed AUCs of 0.933/0.93 in the discovery/validation group. The panel also showed commendable efficacy in indifferent CRC stages, with an AUC of 0.918 for stages 0/I, 0.862 for stage II, and 0.845 for stage III. Conclusions: Urine metabolomecould distinguish CRC from healthy control and reflect the changes in different stages of CRC. Potential biomarkers might be developed by targeted metabolomic analysis.
The use of CRP testing and prescription of antibiotic therapy: a population-based stu...
Francesco Lapi
Ettore Marconi

Francesco Lapi

and 5 more

October 27, 2023
The C-reactive protein (CRP) can guide the antibiotic prescription for infectious diseases which are likely viral. We identified all patients, aged 15 years or older, being registered in the database between January, 1, 2000 and December, 31, 2019 and newly diagnosed with upper respiratory tract infections (URTIs), COPD- or asthma-related exacerbations. From the date of these diagnoses, patients were followed up until occurrence of antibiotic prescription (for these indications) up to December 31, 2019. The association between the prescription of CRP and the outcome was investigated using a nested case-control analysis. In a cohort of 469,684 patients being diagnosed for URTI (83%), COPD- (11%) and asthma (7%)-related exacerbations, 28688 (6.11%) were prescribed with antibiotics because of the aforementioned indications. Of note, 98% of cases were not tested with CRP. Those receiving antibiotics showed a greater propensity to be previously tested for CRP than related controls. Our findings indicate that most of the antibiotic prescriptions for the investigated conditions did not report prior evaluation of CRP values. Nevertheless, it seems that some GPs properly used CRP before deciding for an antibiotic therapy. Further information and incentives in using CRP test should be therefore sustained in primary care.
COST-EFFECTIVENESS ANALYSIS OF HLA-B*15:02 SCREENING BEFORE TREATMENT OF EPILEPSY IN...
eric tanoto
Herlyani Khosama

eric tanoto

and 7 more

October 27, 2023
Aim: Adverse skin reactions due to drugs such as Stevens Johnson Syndrome (SJS) and Toxic Epidermal Necrolysis (TEN) occur in 3% of people receiving anti epileptic drugs (AED). Although SJS/TEN has a low incidence, the mortality and morbidity rates are high. Indonesia has not adopted HLA-B*1502 screening prior to administration of carbamazepine (CBZ), although previous studies found a relationship between HLA-B*1502 and SJS/TEN. Methods: A hybrid decision tree and Markov model was developed to evaluate three strategies for treating newly diagnosed focal epilepsy: CBZ direct therapy, levetiracetam (LEV) direct therapy, and therapy based on HLA-B*15:02 test results. From a societal perspective, base case and sensitivity analyses were carried out over a lifetime. Results: Direct administration of CBZ appears to have a slightly lower average cost than the HLA-B*15:02 allele screening strategy. The increase in quality-adjusted life year (QALY) in HLA-B*15:02 screening before treatment related to the cost difference reached 0.519 with an incremental cost-effectiveness ratio (ICER) of around USD 984 per unit of QALY acquisition. Direct treatment of LEV increased treatment costs by almost USD 2000 on average compared to the standard CBZ strategy. The increase in QALY is 0.834 in direct levetiracetam treatment, with an ICER of around USD 2230 for each QALY processing. Conclusion: Calculation of the cost-effectiveness of lifetime epilepsy therapy in this study found that the initial screening strategy with the HLA-B*15:02 test was the most cost-effective.
From pattern to process: the evolution of using shed snake skin in bird nests
Vanya Rohwer
Jennifer Houtz

Vanya Rohwer

and 4 more

October 27, 2023
Ecological context is central for understanding the evolution of traits. We explore a unique and poorly studied avian behavior: the use of shed snake skins in nest construction and suggest that the evolution of this behavior is context dependent upon, at least, nest morphology and predator communities. Of the 78 species from 22 families reported to use shed snake skin, all but one are passerines, and this behavior is disproportionately observed in cavity-nesting species. Next, we tested three hypotheses whereby snake skin could award fitness benefits (nest predation, nest microbiotas, and nest ectoparasites) and found support for the predation hypothesis. Snake skin reduced nest predation in cavity, but not cup, nests. These unequal fitness benefits highlight different ecological conditions between nest morphologies and likely explains why, across species, cavity-nesting birds show this behavior more frequently and use snake skin more consistently in nest construction compared to cup-nesting birds.
Species richness enhances natural enemy biomass stability by decreasing their tempora...
Lucile Muneret
Audrey Alignier

Lucile Muneret

and 9 more

October 27, 2023
While the temporal stability of communities of natural enemies in agroecosystems is crucial to sustain pest control services over time, little is known about what drives this stability. Using a 6-year dataset composed of carabid collections, together with local and landscape-level management descriptors from 57 arable fields in France, we examined the abiotic and biotic drivers of mean carabid biomass and its inter-annual variation in each field. We show that mean α-richness increases the mean and stability of carabid biomass by decreasing the temporal turnover of the community. Surprisingly, carabid asynchrony and evenness had no influence on either stability or mean carabid biomass. At the landscape level, diversifying crop phenology appears to be the most efficient way to support carabid biomass stability. The stability of agrosystem functioning requires further analysis because the mechanisms operating in such habitats may be totally different from those operating in natural or experimental grasslands.
Primary cutaneous plasmacytosis successfully treated with topical corticosteroids and...
Thanyathorn Nuchanatanon
Settanan  Plangsiri

Thanyathorn Nuchanatanon

and 2 more

October 27, 2023
A document by Thanyathorn Nuchanatanon. Click on the document to view its contents.
Intracranial hypertension and radiculopathy in Neurobrucellosis: A case report
Mehri  Salari
Nasser Moradi

Mehri Salari

and 3 more

October 27, 2023
Intracranial hypertension and radiculopathy in Neurobrucellosis: A case report
A task-driven sampling method based on graph convolution for 3D point cloud compressi...
Yakun Yang
Anhong Wang

Yakun Yang

and 3 more

October 27, 2023
The previous point cloud compression methods only consider reducing the amount of data. However, in applications such as autonomous driving, the compression methods not only require smooth transmission, but also improve the efficiency of downstream tasks. To this end, we propose a task-driven sampling network based on graph convolution to achieve point cloud compression and recovery. First, we present a task-driven downsampling network based on graph convolution to compress the point cloud. Then, we present an upsampling network based on graph convolution to enhance and recover the point cloud. In order to optimize the compressed point cloud for task, we add the task loss to loss function for end-to-end training. Experiments for point cloud classification task on ModelNet40 dataset show that the compressed point cloud obtained through our network can achieve higher classification accuracy compared to other similar methods, and the reconstructed point cloud can further improve classification accuracy.
Diaphragmatic Extraskeletal Ewing’s Sarcoma Masquerading as Hydatid Disease: A Case R...
Ali Raza
Hritvik Jain

Ali Raza

and 7 more

October 27, 2023
Title: Diaphragmatic Extraskeletal Ewing’s Sarcoma Masquerading as Hydatid Disease: A Case Report
Fetal diagnosis of Meconium Periorchitis: a case report
Ahmed S. Z. Moustafa
Sarah Araji

Ahmed S. Z. Moustafa

and 1 more

October 27, 2023
Fetal meconium periorchitis (MPO) is rare prenatal diagnosis associated with meconium peritonitis. The prenatal ultrasound finding consists of an enlarged fetal scrotum with echogenic fluid and debris. In this report, we describe a case in which a prenatal diagnosis of MPO was accurately made at 32 weeks of gestation. The neonate
Oral Immunotherapy for cashew nut and peanut allergy in children -- a retrospective s...
Maria Breiding
Maarja Soomann

Maria Breiding

and 4 more

October 27, 2023
Background Oral immunotherapy (OIT) is increasingly used for the treatment of childhood food allergies, with limited data available on cashew nut allergy OIT. This study investigated the safety and feasibility of cashew nut OIT, comparing it with peanut OIT. Methods We retrospectively analyzed cashew nut (n=24) and peanut (n=38) OIT cases initiated between 2018 and 2022. Two different starting protocols were used, and nut intake was then incrementally increased by 20-30% every two weeks to reach a maintenance dose of 1 g of nut protein. After consuming the maintenance dose regularly for 18-24 months, a second oral food challenge was performed. Patients who passed this challenge were considered desensitized. The safety of the therapy was evaluated based on the frequency and severity of adverse reactions during the up-dosing phase. Results Over the study period, 33% of cashew nut-allergic and 63% of peanut-allergic patients experienced mild to moderate side effects. Severe reactions occurred in five peanut-allergic children with high initial IgE levels. Six patients with peanut and none with cashew nut OIT, were discontinued due to side effects. The mean duration to reach the maintenance phase was longer for children with asthma or another food allergy. Among children undergoing the second challenge, desensitization was achieved in 88% of cashew nut and 69% of peanut-allergic patients. Conclusion Cashew nut OIT had a low frequency of adverse effects and was generally well tolerated. However, patient characteristics influenced side effect risk and treatment duration, emphasizing the need for individualized OIT plans.
The temporal protein signature analyses of developing human deciduous molar germ
Xiaohang Chen
Jian Zhang

Xiaohang Chen

and 7 more

October 27, 2023
The tooth is one of the ideal models for developmental study, involving in epithelial-mesenchymal transition and cell differentiation. The essential factors and pathways identified in tooth development will help understand the natural development process and the malformations of mineralized tissues such as skeleton. The time-dependent proteomic changes were investigated by healthy human molars proteomics of embryonic stages from the cap-to-early bell stage. A total of 713 differentially expressed proteins (DEPs) with five temporal expression patterns were filtered. 24 potential driver proteins of tooth development were screened by weighted gene co-expression network analysis (WGCNA) including CHID1, RAP1GDS1, HAPLN3, AKAP12, WLS, GSS, DDAH1, CLSTN1, AFM, RBP1, AGO1, SET, HMGB2, HMGB1, ANP32A, SPON1, FREM1, C8B, PRPS2, FCHO2, PPP1R12A, GPALPP1, U2AF2 and RCC2. The hub proteins in different temporal expression patterns were extracted. And the potential cell resources and the temporal expression patterns at transcriptomic level were explored using single cell RNA-sequencing (scRNA-seq). This study provides invaluable resources for the mechanistic studies of human embryonic epithelial and mesenchymal cell differentiation and tooth development.
People with obesity exhibit losses in muscle proteostasis that are partly improved by...
Kanchana Srisawat
Connor Stead

Kanchana Srisawat

and 10 more

October 27, 2023
This pilot experiment examines if a loss in muscle proteostasis occurs in people with obesity and whether endurance exercise positively influences either the abundance profile or turnover rate of proteins in this population. Men with (n = 3) or without (n = 4) obesity were recruited and underwent a 14-d measurement protocol of daily deuterium oxide (D2O) consumption and serial biopsies of vastus lateralis muscle. Men with obesity then completed 10-weeks of high-intensity interval training (HIIT), encompassing 3 sessions per week of cycle ergometer exercise with 1 min intervals at 100 % maximum aerobic power interspersed by 1 min recovery periods. The number of intervals per session progressed from 4 to 8, and during weeks 8-10 the 14-d measurement protocol was repeated. Proteomic analysis detected 352 differences (p < 0.05, false discovery rate < 5%) in protein abundance and 19 (p < 0.05) differences in protein turnover, including components of the ubiquitin-proteasome system. HIIT altered the abundance of 53 proteins and increased the turnover rate of 22 proteins (p < 0.05) and tended to benefit proteostasis by increasing muscle protein turnover rates. Obesity and insulin resistance are associated with compromised muscle proteostasis, which may be partially restored by endurance exercise.
Setting clinically relevant thresholds for notification of canine disease outbreaks t...
Carmen Tamayo Cuartero

Carmen Tamayo Cuartero

and 4 more

October 27, 2023
Author affiliations: University of Bristol, Bristol, UK (C. Tamayo, E. Szilassy, F. Sánchez-Vizcaíno), University of Liverpool, Liverpool, UK (A.D. Radford), University of Cambridge, Cambridge, UK (J.R. Newton)*Corresponding author. Tel. +44(0)7444566819. Email address: carmen.tamayo@bristol.ac.ukABSTRACTIntroduction: The Small Animal Veterinary Surveillance Network (SAVSNET) has developed mathematical models to analyse veterinary practice and diagnostic laboratory data to detect genuine outbreaks of canine disease in the UK. There are, however, no validated methods available to establish the clinical relevance of these genuine statistical outbreaks before their formal investigation is conducted. The aim of this study was to gain actionable understanding of veterinary practitioner’s preferences regarding which outbreak scenarios have a substantial impact in veterinary practice for six priority canine diseases in the UK.Methodology: An intensity sampling approach was followed to recruit veterinary practitioners according to their years of experience and the size of their practice. In depth semi-structured and structured interviews were conducted to describe outbreak notification and outbreak response thresholds for six canine endemic diseases, exotic diseases and syndromes. These thresholds reflected participants’ preferred balance between levels of excess case incidence and predictive certainty of the detection system. Interviews were transcribed and a thematic analysis was performed using NVivo 12.Results: Seven interviews were completed. Findings indicate higher preferred levels of predictive certainty for endemic diseases than for exotic diseases, ranging from 95-99% and 80-90%, respectively. Excess case incidence levels were considered clinically relevant at values representing an increase of two to four times the normal case incidence expectancy for endemic agents like parvovirus, and where they indicated a single case in the practice’s catchment area for exotic diseases like leishmaniosis and babesiosis.Conclusion: This study’s innovative methodology uses veterinary practitioners’ opinion to inform the selection of a notification threshold value in real world applications of stochastic canine outbreak detection models. The clinically relevant thresholds derived from participants’ needs will be used by SAVSNET to inform its outbreak detection system and to improve its response to canine disease outbreaks in the UK.Keywords: Disease surveillance, canine diseases, qualitative research, outbreak detection, outbreak reporting.1 IntroductionOne of the main factors that determine the effectiveness of an epidemic response is the timeliness of detection and notification to those that are potentially affected (1). In the UK, surveillance systems in farm animals and public health run centrally by government departments and agencies to identify increasing disease trends and detect disease outbreaks in their early stage, facilitating the prevention and control of health threats nationally and regionally (2,3). The relevant information derived from these surveillance activities is shared with the public via weekly reports (4) and online dashboards (5). However, these surveillance protocols do not currently exist in small companion animals, for which there is no standardised system of disease reporting or routine collection of surveillance data at a national level. This leaves canine populations in the UK vulnerable to epidemic threats.To begin to bridge this gap, the SAVSNet-Agile initiative (6) is developing a nationwide system for the timely detection and response to canine disease outbreaks in the UK. However, before such a surveillance and control system can be set up and implemented, it is necessary to determine which notification thresholds of increased level in case incidence relative to a previously identified baseline of expected cases would warrant alerting relevant stakeholders of potential outbreak threats.There are several methods that have been described to determine statistical outbreak notification thresholds. These methods vary depending on the disease type and the quality of the data that is available for surveillance purposes. For diseases that are endemic to the country, systems rely on historical data to establish a baseline level of disease and then use different mathematical methods to determine notification thresholds based on increases in case incidence, relative to the previously identified baseline (7,9). Other commonly used methods to establish outbreak notification thresholds are multi-chart schemes, which combine the results of individual time series that enable the rapid detection of subtle changes in disease (9), or methods that involve setting a number of standard deviations above the baseline of expected cases (10). For exotic and rare diseases, with lacking baseline data to draw patterns from, notification thresholds are defined ad-hoc, and it is often common to accept a single case as a threat that warrants generating an alert (11).Whilst these statistical methods have proven to be powerful for detecting disease anomalies, they often signal outbreaks that are not clinically relevant for veterinarians in practice. Therefore, outbreak notification systems that rely on such statistical signals might overload practitioners with information that is not actionable. In the long term, this could lead to a lack of confidence and engagement with the surveillance and outbreak notification system. To address these limitations, the aim of this study was to explore what threshold values based on veterinary practitioners’ opinion correspond to outbreaks that should be notified when detected by statistical methods because of their significant impact in veterinary practice for six priority canine diseases in the UK (12). In addition, we gained an understanding of the reasons that drive veterinary practitioners in selecting such threshold values and of how their in-practice behaviour can be impacted by clinically relevant outbreaks. To achieve these aims, an innovative methodology was developed based on the combination of semi-structured and structured interviews with companion animal veterinarians.2 Materials and methodsEthical approval for this work was granted by the University of Bristol Faculty of Health Sciences Ethics Committee (FREC, reference code: 98843).2.1 Study populationThe population of interest for this study were small animal veterinary clinicians working in the UK at the time of its conduction. Study participants were selected from this population following an intensity sampling approach, a type of purposive sampling to select information-rich cases located at the end of a population’s distribution (13). To do so, relevant population characteristics, or descriptors, were defined. These descriptors were believed to influence participant perspectives and behaviour regarding canine epidemics, and therefore influence their responses during the interviews. The following descriptors and levels of interest were used in the sampling process:Years of experience in small animal practice: it was assumed that more senior veterinarians are more likely to have experienced canine outbreaks throughout their career and have spent more time in practice overall, and this could influence their opinions and decision-making. Cut-off points were established to differentiate newly graduated veterinarians from those with many years of in-practice experience.Recent graduates: with less than five years of experience.Senior veterinarians: with over 10 years of experience.Practice size: since smaller practices have fewer employed veterinarians and see a lower number of cases, compared to bigger veterinary centres, it was expected that an outbreak would affect them differently and could potentially overwhelm their ability to cope with the increase in case incidence. To accurately reflect the difference between small and big veterinary practices, a summary of the existing veterinary practices in the UK was requested to the Royal College of Veterinary Surgeons (RCVS). This database included the total number of registered practices in the UK, and a breakdown of the number of employed veterinarians per practice. The practice directory was analysed to understand what the average size of a practice is and inform the categorisation. A total of 4252 individual veterinary sites were listed on the database. Over half of these sites had four or fewer registered veterinary surgeons (2917 or 68%). A total of 23% (984) of the sites had between five and nine employed veterinarians, and only a small number (348 or 8%) had 10 or more registered veterinary surgeons.Small veterinary practice: with fewer than four employed veterinarians.Large veterinary practices: with more than 10 employed veterinarians.2.2 Participant recruitmentPotential study participants were contacted through different means. Veterinary clinicians who were part of a pre-established network of collaborators for SAVSNET-Agile were emailed directly by the corresponding author (CTC). Further, veterinary practices that contributed data to SAVSNET at the time of the conduction of the study were contacted via email and via their practice management software (PMS); these practices contain a SAVSNET plugin window that can be used by the latter to relay messages to attending veterinarians (14). A participant recruitment advert was posted on the SAVSNET website (15), and shared on social media, namely on Twitter and Facebook. Lastly, an interview to advertise the study was conducted by the corresponding author (CTC) with UK veterinary magazine Vet Times (16).2.3 Interviews with veterinary companion animalsRecruited veterinarians took part in an interview session, which was conducted online via Microsoft Teams (17) or Zoom (18). The overall aim of the interviews was to explore clinically relevant outbreak scenarios for notification for two canine endemic diseases (leptospirosis and parvovirus), two canine exotic diseases (leishmaniosis and babesiosis), and two canine syndromes (respiratory and gastrointestinal disease). The interviews consisted of two components, with different aims.2.3.1 Semi-structured interviewThe first part of the interview followed a semi-structured (19), in-depth format and aimed to gain an understanding of the reasons that drive veterinary practitioners in defining what constitutes a clinically relevant outbreak and to understand how their in-practice behaviour can be impacted by such outbreaks. To facilitate the discussion, the interviewer first provided an overview of the epidemiological characteristics of the disease under consideration. The topic guide developed for the semi-structured interview can be found on Supplementary Material 1.2.3.2 Structured interviewOnce participants had reflected upon the subject matter, the interview changed to a structured format, to understand which outbreak scenarios would be selected by participants to receive timely alerts, due to their potential impact in their practice. Outbreak scenarios were described using two parameters, which represented characteristics of an outbreak notification:Excess case incidence: increased incidence above the expected baseline of cases in your practice’s catchment area, that would be of practical significance to a) warrant a notification about a potential outbreak, and b) drive you to change your behaviour in practice in response to an outbreak. Where selected levels of excess case incidence were different for a) and b), the selected value for the former was used to define a notification threshold, and the value for the latter was used to define an outbreak response threshold for canine diseases.Predictive certainty: level of confidence of the alerts generated by statistical outbreak detection models, defined by their credible interval, which normally takes values that range from 90 to 99% (20).Questions included in the structured interview (Supplementary Material 2) aimed to introduce the concepts of excess case incidence and predictive certainty to study participants and use them to describe disease-specific outbreak scenarios in a way that resonated with participants and their experience in practice.2.4 Data analysisInterview data were audio recorded and transcribed verbatim. All the analyses were conducted on NVivo (version 12) qualitative data analysis software (21). A coding framework was iteratively developed by the corresponding author (CTC) based on expected and emergent themes using deductive and inductive approaches, respectively. To enhance the consistency and reliability of the analysis, two authors (CTC, FSV) independently coded the transcript data from one of the interviews. Codes generated deductively and inductively from interview transcripts were grouped together into themes by following a hybrid approach to thematic analysis (22,23) (Figure 1). To ensure reliability and transparency, themes were continuously compared to the interview transcripts, to ensure they were true to the original data (24).
Contrasting physiological responses of Chlamydomonas reinhardtii to fibrous and layer...
Zhongquan Jiang
Sijia Wu

Zhongquan Jiang

and 6 more

October 27, 2023
Microalgae interact with mineral particles in aqueous environment, yet how clay minerals affect physiological processes in algal cells remain unexplored. In this study, we compared the effects of palygorskite (Pal) and montmorillonite (Mt), which respectively represent fibrous and layered clay minerals, on the physiological processes of Chlamydomonas reinhardtii. It was observed that C. reinhardtii responded differently to the treatments of Pal and Mt. The Pal particles bound tightly to and even inserted cells, resulting in a significantly decrease of cell numbers from 27.35 to 21.02*107 mL-1. However, Mt was only loosely attached to the cell surface. The photosynthesis in the algal cells was greatly inhibited by Pal, with rETRmax significantly reduced from 103.80 to 56.67 μmol electrons m-2s-1 and downregulation of IF2CP, psbH and OHP1, which were key genes involved in photosynthesis. In addition, Pal reduced the quantities of proteins and polysaccharides in extracellular polymeric substances (EPS) and the P uptake by C. reinhardtii when the P level in the culture was 3.15 mg/L. However, no significant changes were found regarding the above EPS components or the amount of P in algal cells upon the addition of Mt. Together, the impacts of fibrous Pal on C. reinhardtii was more profound than those of layered Mt.
Phylogenetic Analysis and Genetic Diversity of Bacteria Strains isolated from oral ca...
Abiodun Osatogbe

Abiodun Osatogbe

October 27, 2023
Oral bacteria of malnourished children were investigated from Sokoto State Specialist Hospital. Insufficient nutrients create malnutrition, and food influences health. In microbiological isolation, aseptic mouth samples are evaluated. Swabs are spun across the pharynx for 15–20 seconds to collect samples. Self-sealing polythene containers convey samples to the lab for reliable analysis. Nutrient-sorbitol-bouillon agar isolate. Gram staining and biochemical testing identify healthy agar microorganisms. Dry slide examined using an oil-immersed objective lens. Characterising patient oral bacteria isolates using PCR. Some bacteria that were found in the patient’s mouth were Staph aureus, Escherichia coli, Streptococcus pyogenes, Cronobacter condiment, Photorhabdus luminscenes, Klebsiella aeruginosa, Bacillus tequillensis, and Yersinia molderath. 25% of isolates include Cronobacter condimenti. Klebsiella aeroginosa, 12.5% Staphylococcus aureus, 9.1% Escherichia coli, 9.1% Streptococcus pyogenes, 4.5% Bacillus tequillenses, and 4.5% Yersinia molderath were found in oral 15% of patients had Klebsiella aeroginosa, 10% Photorhabdus luminscenes, 10% Haemophilus influenza, 10% Staphylococcus aureus, E. coli, Streptococcus pyogenes, Bacillus megaterium, Cronobacter condimenti, and Bacillus tequillensis, and 10% each of We identified ten bacterial strains using colony morphology, biochemical assays, 16S rDNA sequence analysis, species-specific PCR, and phylogenetic trees of six isolated bacteria. A 1450-bp 16S RRNA gene amplicon separates PCR-amplified genomic DNA on agarose gel electrophoresis for all isolated bacteria. All isolated bacteria have 97.9–99.9% coverage and similarity. Sequence submission to NCBI and accession number assignment. Malnutrition affects millions of poor children worldwide. It can temporarily impede cognition, economic output, reproduction, disease, and death. Malnutrition prevention requires food security, healthcare, oral hygiene, and nutrition.
Normal Erythroid Precursors in Diamond-Blackfan Anemia: A Rare Case Highlighting Chal...
Daniel Prior
Anna Sowa

Daniel Prior

and 2 more

October 27, 2023
A document by Daniel Prior. Click on the document to view its contents.
Robust and Correspondence-Free Point Cloud Registration: an Extended Approach with Mu...

Federica Di Lauro

and 2 more

October 27, 2023
Point cloud registration is a fundamental problem in robotics, critical for tasks like localization and mapping. Most approaches to this problem use feature based techniques. However, these approaches are limited when dealing with un-structured environments where meaningful features are difficult to extract. Recently, an innovative global point cloud registration algorithm, PHASER, which does not rely on geometric features or point correspondences, has been introduced. It leverages Fourier transforms to identify the optimal rigid transform that maximizes cross-correlation between source and target point clouds. PHASER can also incorporate additional data channels, like LiDAR intensity, to enhance registration results. Because it does not rely on local features and because of its ability to exploit additional data, PHASER is particularly useful when dealing with very noisy point clouds or with many outliers. For this reasons, we propose an extension to PHASER that considers multiple plausible rototranslation hypotheses. Our extended approach outperforms the original PHASER algorithm, especially in challenging scenarios where point clouds are widely separated. We validate its effectiveness on the DARPA SubT, and the Newer College datasets, showcasing its potential for improving registration accuracy in complex environments.
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