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Love thy neighbour? Tropical tree growth and its response to climate anomalies is med...
Daniela Krebber
Claire  Fortunel

Daniela Nemetschek

and 18 more

April 21, 2024
Taxonomic diversity effects on forest productivity and response to climate extremes range from positive to negative, suggesting a key role for complex interactions among neighbouring trees. To elucidate how neutral interactions, hierarchical competition and resource partitioning between neighbours shape tree growth and climate response in a highly diverse Amazonian forest, we combined 30 years of tree censuses with measurements of water and carbon related traits. We modelled individual tree growth response to climate and neighbourhood to disentangle the relative effect of neighbourhood densities, trait hierarchies and dissimilarities. While neighbourhood densities consistently decreased tree growth, trait dissimilarity increased it, and both influenced climate response. Greater water conservatism provided a competitive advantage to focal trees in normal years, but water spender neighbours reduced this effect in dry years. By highlighting the importance of density and trait-mediated neighbourhood interactions, our study offers a way towards improving predictions of forest response to climate change.
Identifying marine invasion threats and management priorities through introduction pa...
Dan Bayley
Paul Brewin

Dan Bayley

and 4 more

April 20, 2024
The threat from novel marine species introductions is a global issue. When Non-native marine species are introduced to novel environments and become invasive, they can affect biodiversity, industry, ecosystem function, and both human and wildlife health. Isolated areas with sensitive or highly specialised endemic species can be particularly impacted. The global increase in the scope of tourism activities together with a rapidly changing climate, now put these remote ecosystems under threat. In this context, we analyse invasion pathways into South Georgia & the South Sandwich Islands (SGSSI) for marine non-native species via vessel biofouling. The SGSSI archipelago has high biodiversity and endemism, and has historically been highly isolated from the South American mainland. The islands sit just below the Polar Front temperature boundary, affording some protection against introductions. However, the region is now warming and SGSSI increasingly acts as a gateway port for vessel traffic into the wider Antarctic, amplifying invasion likelihood. We use remote AIS vessel-tracking data over a two-year period to map vessel movement and behaviour around South Georgia, and across the ‘Scotia Sea’, ‘Magellanic’, and northern ‘Continental High Antarctic’ ecoregions. We find multiple vessel types from locations across the globe frequently now enter shallow inshore waters and stop for prolonged periods (weeks/months) at anchor. Vessels are active throughout the year and stop at multiple port hubs, frequently crossing international waters and ecoregions. Management recommendations to reduce marine invasion likelihood within SGSSI include initiating benthic and hull monitoring at the identified activity/dispersion hubs of King Edward Point, Bay of Isles, Gold Harbour, St Andrews Bay and Stromness Bay. More broadly, regional collaboration and coordination is necessary at neighbouring international ports. Here vessels need increased pre- and post-arrival biosecurity assessment following set protocols, and improved monitoring of hulls for biofouling to pre-emptively mitigate this threat.
Dynamically driven correlations in elastic net models reveal sequence of events and c...
Burak Erman
Albert Erkip

Burak Erman

and 1 more

April 20, 2024
Protein dynamics orchestrate allosteric regulation, but elucidating the sequence of events and causal relationships within these intricate processes remains challenging. We introduce the Dynamically Perturbed Gaussian Network Model (DP-GNM), a novel approach that uncovers the directionality of information flow within proteins. DP-GNM leverages time-dependent correlations to achieve two goals: identifying driver and driven residues and revealing communities of residues exhibiting synchronized dynamics. Applied to wild type and mutated structures of Cyclophilin A, DP-GNM unveils a hierarchical network of information flow, where key residues initiate conformational changes that propagate through the protein in a directed manner. This directional causality illuminates the intricate relationship between protein dynamics and allosteric regulation, providing valuable insights into protein function and potential avenues for drug design. Furthermore, DP-GNM’s potential to elucidate dynamics under periodic perturbations like the circadian rhythm suggests its broad applicability in understanding complex biological processes governed by environmental cycles.
Design of Overhead Ground Wire Repair Robot Based on Unmanned Aerial Vehicles
Yang Yang
Zeyu Lei

Yang Yang

and 5 more

April 20, 2024
In response to the current issue of the inability to accurately transport overhead ground wire repair robots to repair points and efficiently repair broken and loose ground wires, this paper designs an overhead ground wire repair robot based on unmanned aerial vehicle. Firstly, the mechanical structure of the overhead ground wire repair robot was selected and de-signed to achieve information transmission and collaborative operation of various modules; Then, the dual closed-loop PID control method is used to control the stable position and posture of the drone, achieving the drone’s tracking of the robot’s position. At the same time, the mechanical structure and control method of the drone’s detachment device are designed to co-operate with the overhead ground wire repair robot, ensuring the accurate completion of the repair operation; Finally, a prototype of an aerial ground wire repair robot based on drones was developed and successfully applied to the repair of broken aerial ground wires in towers 66-67 of the 500kV Jiangzi Line in Ya’an, verifying the excellent engineering application value of the unmanned aerial ground wire repair robot studied in this paper.
A time course analysis through diapause reveals dynamic temporal patterns of microRNA...
Kevin T Roberts
Rachel Steward

Kevin Roberts

and 4 more

April 20, 2024
Organisms inhabiting highly seasonal environments must cope with a wide range of environmentally induced challenges. Many seasonal challenges require extensive physiological modification to survive. In winter, to survive extreme cold and limited resources, insects commonly enter diapause, which is an endogenously derived dormant state associated with minimized cellular processes and low energetic expenditure. Due to the high degree of complexity involved in diapause, substantial cellular regulation is required, of which our understanding primarily derives from the transcriptome via messenger RNA expression dynamics. Here we aim to advance our understanding of diapause by investigating microRNA (miRNA) expression in diapausing and direct developing pupae of the butterfly Pieris napi. We identified coordinated patterns of miRNA expression throughout diapause in both head and abdomen tissues of pupae, and via miRNA target identification, found several expression patterns to be enriched for relevant diapause-related physiological processes. We also identified two candidate miRNAs, miR-14-5p and miR-2a-3p, that are likely involved in diapause progression through the ecdysone synthesis pathway, a critical regulator of diapause termination. miR-14-5p targets phantom, a gene in the ecdysone synthesis pathway, and miR-2a-3p, which has been found to be expressed in response to ecdysone. Together, the expression patterns of these two miRNAs match our current understanding of the timing of hormonal regulation of diapause in P. napi and provide interesting candidates to further explore the mechanistic role of microRNAs in diapause regulation.
The Rising Potential of Deep Eutectic Solvents: A Patent Analysis of Extraction and E...
Muhammad Saqib Iqbal
Dr. Zulhasni Abdul Rahim

Muhammad Saqib Iqbal

and 1 more

June 06, 2024
Sustainable alternatives to traditional solvents (deep eutectic solvents (DESs) are now in the works. Because of their unique qualities, they may be used in various contexts. The potential of DESs in extraction processes and energy storage technologies has been evaluated by looking at recently issued patents. Compared to toxic solvents, DES extraction procedures are safer and more environmentally friendly for isolating desired chemicals. DES electrolytes are well-suited for high-performance batteries and supercapacitors due to their high ionic conductivity and electrochemical stability. However, significant commercial use still needs to be improved by issues with scalability, economic feasibility, and legislation. Despite these challenges, there are rising prospects for DESs to move from academic curiosity to practical solutions, as evidenced by patent applications and research advancements. DES platform technologies can improve process efficiency and lessen environmental consequences if implemented, coordinated, and removed barriers. This patent research provides insight into future technology directions for releasing DESs’ full potential.
A numerical analysis of the impact of gas pressure and dielectric material on the gen...

Sajad Hajikhani

and 2 more

April 23, 2024
A document by Ramin Mehrabifard. Click on the document to view its contents.
Safer National Maternity Care: Prospects and Challenges
Dr Mohamed I.A. Saleh

Saleh MIA

April 20, 2024
The delivery of safe maternity care has become an increasing focus of attention, especially in recent years due to high-profile serious failings in care at individual NHS trusts. 1, 2 Preventable tragic adverse events in maternity care have devastating consequences for families, and the associated negligence claims create huge costs for the NHS. 4 Reducing harm in maternity care is a major priority to protect families and NHS sustainability. 5 Much work to date has focused on identifying what goes wrong in maternity care. Much has been learned from inquiries and investigations into adverse events in maternity care. 1, 35 However, the resulting recommendations have not, as in other areas of quality and safety, always had impacts that are as powerful or consistent as might be hoped. 21 This review article takes a fresh and positive perspective and shares learning on the key findings of the recent national maternal enquiries and investigations reports into adverse events in the care given to some mothers and babies. 5, 6 It makes the case for universal implementation of specific key measures in order to improve the quality of maternity care and its safety profile. 35
Novel Identification of mAbs by Raman Spectroscopy
Maoqin Duan
Jun Liu

Maoqin Duan

and 4 more

April 05, 2024
The identification of the critical quality attributes (CQAs) of monoclonal antibodies (mAbs) is a key component of quality by design. Traditional detection methods for the identification of mAbs, such as peptide mapping and weak cation-exchange chromatography (WCX-HPLC), require sophisticated equipment, experienced staff, and a considerable amount of time. In this study, the novel identification of mAbs was performed using Raman spectroscopy, combined with the evaluation of other CQAs, such as the appearance and purity of size-exclusion high-performance liquid chromatography(SEC-HPLC), charge heterogeneity of WCX-HPLC, and bioassay. Raman spectroscopy achieved comparable results to the conventional, but complex, approach to identifying anti-vascular endothelial growth factor antibodies. Raman spectroscopy was used to identify and distinguish between different antibody types. Additionally, the Raman technique with principal component analysis of multivariate algorithms is rapid, efficient, and accurate for mAb identification; this technique has great potential to support biopharmaceutical development and counterfeiters.
The Unheard Echoes of Equality: Perceptions of Wealth Inequality in the Heart of Euro...
Filip Cervenka
Robin Maialeh

Filip Cervenka

and 1 more

April 20, 2024
This study examines various attitudes to wealth inequality in Czechia and the broader CEE region and provides valuable insights into global research on inequality perceptions. By focusing on this, to date, underexplored region, our research contributes to the current understanding of wealth inequality at the global scale. The findings revealed remarkable similarities between Czech and US respondents in terms of their perceptions and preferences. On average, participants estimated that the top 20% of the population in the Czech Republic holds approximately 48% of total wealth, while expressing a preference for a lower wealth share of around 34% in the ideal scenario. These results are in alignment with previous research that highlighted a prevalent lack of awareness of actual levels of wealth inequality combined with a consistent preference for the reduction of inequality levels. By elucidating these patterns, this study contributes to the growing body of literature in the field.
Blood inflammatory markers and cytokines in patients with COVID-19 and bacterial coin...
Qingqing Bi
Jie Zhu

Qingqing Bi

and 6 more

April 20, 2024
Background: Bacterial coinfection in patients with SARS-CoV-2 infection is an important risk factor for death. This study investigated and analyzed whether there were differences in levels of serum inflammatory markers in patients with SARS-CoV-2 and bacterial coinfection compared with those without bacterial infection. Methods: A total of 121 inpatients with SARS-CoV-2 infection admitted to Qingdao Central Hospital from December 7, 2022, to February 7, 2023, were included. Patients were divided into a bacteria-positive group (61 cases) and a bacteria-negative group (60 cases) according to whether they had bacterial infections. PCT, CRP, and 12 cytokines were compared between groups, and the composition of bacterial species in the positive group was statistically analyzed. Results: The serum levels of CRP (Z = 3.95, P < 0.001), PCT (Z = 3.20, P = 0.001), IL-1β (t = 2.90, P = 0.008), IL-2 (t = 3.83, P = 0.001), IL-12p70 (t = 3.28, P = 0.004), IL-17 (t = 2.22, P = 0.039) and TNF-α (t = 3.02, P = 0.007) between the two groups were significantly different. IL-17 increased more significantly than other markers, while IL-6, IL-8, IL-10, interferon-α, interferon-γ, IL-4 and IL-5 were not statistically significant (P > 0.05). Among the 61 bacteria-positive patients, 27 patients were positive for one species, mainly Staphylococcus aureus, Haemophilus influenzae, and Acinetobacter baumannii. Eleven patients were two species positive, and Acinetobacter baumannii combined with Pseudomonas aeruginosa was common. Conclusions: Serum PCT and CRP levels in SARS-CoV-2-infected patients with bacterial coinfection are higher than those in patients without bacterial infection. Cytokines such as IL-1β, IL-2, IL-12 p70, IL-17, and TNF-α may be involved in the progression of COVID-19 combined with bacterial infection. They can be used as potential markers to evaluate the disease condition and prognosis.
Atypical presentation and management of a neonate with alveolar capillary dysplasia:...
Niki Dermitzaki
Chatzigiannis N

Niki Dermitzaki

and 7 more

April 20, 2024
Atypical presentation and management of a neonate with alveolar capillary dysplasia: A case reportTo the Editor,Alveolar capillary dysplasia with misalignment of capillary veins (ACD/MCV) is a rare interstitial lung disease caused by maldevelopment of alveoli and capillaries. Neonates typically present with intractable pulmonary hypertension within the first 48 hours of life and have a very short life expectancy 1. However, atypical cases have been described with a late, less fulminant clinical presentation and prolonged survival on pulmonary vasodilators, providing a window for bilateral lung transplantation 2.Case presentationOur patient is a female neonate born at 37 weeks of gestation, weighing 3080 gr after an uncomplicated pregnancy. She was admitted to the neonatal intensive care unit (NICU) at the age of two hours due to pneumothorax, which was managed conservatively and absorbed. On the second day of life, she was intubated due to worsening respiratory distress. Over the next several days, unsuccessful extubation trials were attempted. Eventually, she was weaned off oxygen on the 11th day. However, on postnatal day 16, significant respiratory deterioration was noted. Echocardiography revealed moderate pulmonary hypertension, and sildenafil and dopamine were initiated. The patient’s clinical condition and echocardiography findings gradually deteriorated. High-frequency oscillatory ventilation (HFOV) was commenced with a fraction of inspired oxygen (fiO2) up to 1.0. As our patient continued to deteriorate (maximum oxygenation index OI:32 on day 23), we used intravenous iloprost as a pulmonary vasodilator, titrated up to 20 ng/kg/min in combination with levosimendan up to 0.1 mcg/kg/min, to improve cardiac contractility and reduce afterload and pulmonary resistance. Of note, nitric oxide was unavailable in our center at this time. Although gradual improvement in pulmonary hypertension was noticed, our patient developed severe pulmonary edema, which was managed with a continuous intravenous infusion of furosemide titrated up to 0.4mg/kg/h. Intravenous medications were gradually withdrawn, and we could switch to conventional ventilation on the day of life 34. The infant was extubated ten days later.Computed tomography of the lungs showed bilateral symmetrical ground-glass opacification, and genetic testing with whole exome sequencing (WES) revealed a heterozygous missense variant of the FOXF1 gene (c.229T>C;p.Phe77Leu) in exon 1.Our patient remained stable on a high-flow nasal cannula (HFNC) until the 68th day when she was reintubated, and echocardiography revealed severe pulmonary hypertension. On the 72nd day of life, she was transferred to another NICU at the request of her parents. She remained intubated, treatment with pulmonary vasodilators was continued, and finally, a tracheostomy was performed. She eventually died at five months of age. The parents have consent to report the medical details of the neonate.
Unveiling Stage Zero conditions in the New Forest National Park: A drone-based Struct...
Edward Fleming

Edward Fleming

April 20, 2024
A document by Edward Fleming. Click on the document to view its contents.
The efficacy and safety of Acetaminophen for pain relief
Hayder M.  Al-kuraishy
Ali Al-Gareeb

Hayder M. Al-kuraishy

and 6 more

April 20, 2024
Acetaminophen is a non-narcotic analgesic used as an analgesic and antipyretic. Acetaminophen is used for mild to moderate pain; its efficacy is low as analgesic as compared to non-steroidal anti-inflammatory drugs (NSAIDs) as it has no any anti-inflammatory effect. Despite of its well-known use and safely, however; the precise mechanism of acetaminophen still enigmatic. Findings from preclinical studies suggest that the main mechanism of acetaminophen is related to the inhibition of cyclooxygenase 3 (COX-3) which is variant of COX-1 expressed in the brain. However, the profound analgesic antinociceptive effects of acetaminophen cannot depend merely on this pathway. Further findings from preclinical and clinical studies confirmed that acetaminophen and its metabolites can modulate different signaling pain pathways other than COX pathway. Thus, this review revises the potential mechanistic pathways of acetaminophen in relation to its clinical applications.
Lycorine destabilizes lipid rafts to inhibit inflammation via LXRα signal in the lung...
Fuhan Wang
Kan Li

Fuhan Wang

and 4 more

April 20, 2024
AbstractBackground and Purpose:Lycorine is an alkaloid that was in the bulb of the genus Lycoris. It has properties of anti-inflammatory. This study aimed to investigate the molecular mechanism by which lycorine can reduce acute lung injury (ALI).Experimental Approach: ALI model was established by intranasal injection of lipopolysaccharide (LPS). In vitro, A549 cells were treated with LPS and pretreated with lycorine for 1 hour.Key Results: The results showed that lycorine reduced histopathological changes in lung, myeloperoxidase (MPO) activity, and the production of inflammatory cytokines such as TNF-α, IL-1β, and IL-6 in mice. Lycorine dose-dependently inhibited the production of TNF-α, IL-1β, and IL-6. It also inhibited the transmission of TLR4/NF-κB passway in LPS-stimulated A549 cells. Lycorine increased cholesterol efflux through the activated LXRα-ABCA1/ABCG pathway. Lycorine has a good binding ability with LXRα. After adding the LXRα inhibitor, the anti-inflammatory effect of lycorine was eliminated.Conclusion and Implications: Lycorine can reduce ALI that was induced by lipopolysaccharide. The anti-inflammatory mechanism of lycorine is related to the up-regulation of the LXRα-ABCA1/ABCG pathway, which inhibits TLR4-mediated inflammation by increasing cholesterol efflux and reducing TLR4 transport to lipid rafts.Keywords: Lycorine; ALI; Lipid raft; TLR4; LXRαIntroductionAcute lung injury (ALI) is a high morbidity and mortality disease. In recent years. Many people were died of ALI due to influenza and COVID-19(J. G. Zhang et al., 2021). ALI is the damage of alveolar epithelial cells and capillary endothelial cells caused by multiple direct or indirect injury factors. Alveolar epithelial cells are widely present in lung tissue. The damage of alveolar epithelial cells will cause diffuse pulmonary interstitial fibrosis and swelling(Shi et al., 2014). Lipopolysaccharide (LPS) is one of the important causes of ALI(Hu et al., 2021). LPS expressed its effects through the TLR family in cell membranes. The TLR family was related to inflammatory cytokines(Gross et al., 2020; Vitiello et al., 2021). TLR4 played an important role in natural immunity. LPS can promote the formation of lipid rafts. After LPS stimulation, TLR4 was recruited into the lipid raft(Kaelberer, Caceres, & Jordt, 2020). It interacted with some molecules on the lipid raft. It could activate the NF-κB signaling pathways and promoted the production of cytokines(Liao, Liu, & Zhang, 2021; S. Xu et al., 2023). Lots of cytokines caused the body’s inflammatory response, leading to multiple organ failures in severe cases(H. C. Wang, Wu, & Kong, 2021).The production of inflammatory factors required regulating signaling pathways(Alikiaii, Bagherniya, Askari, Johnston, & Sahebkar, 2021; Novoselova et al., 2015). Most signals were passed through something on the cell membrane, and lipid rafts were one of them(D’Aprile, Prioni, Mauri, Prinetti, & Grassi, 2021). Lipid rafts were the platform for protein docking, closely related to membrane signal transduction and protein sorting(Holani et al., 2020; Suzuki, 2012). The stability of lipid rafts played an important role in the TLR4/NF-κB pathway(Adebiyi, Soni, John, & Yang, 2014; B. Liu et al., 2018; Zhang et al., 2023). It was showed that the destruction of lipid rafts in lung epithelial cells could inhibit inflammatory response by LPS-induced(Colardo et al., 2021; Singh et al., 2021). The destruction of lipid rafts was associated with cholesterol metabolism on the cell membrane. Previous studies had found that cholesterol metabolism was related to nuclear receptors, liver X receptor (LXR), and had a regulatory effect on lipid metabolism. LXRs (Liver X Receptor α and β) are members of the nuclear hormone receptor superfamily of ligand-activated transcription factors (Hammer et al., 2021). Activation of LXRs could induce gene expression related to cholesterol excretion, such as ABCG(Song, Yan, Wang, & Lou, 2021; Wan et al., 2021). LXRs regulated the cholesterol metabolism of cells, affected the inflammatory response, and inhibited the expression of inflammatory genes(Kongkwamcharoen, Itharat, Pipatrattanaseree, & Ooraikul, 2021). It may be related to the pathogenesis of ALI. Currently, there is no very effective way to treat this disease. Some herbal medicines have been found to have anti-inflammatory effects and may be used to treat ALI.Lycorine is an alkaloid in the bulb of Lycoris Radiata, a plant of the family Lycoris Radiata. It has effective anti-inflammatory, anti-viral and anti-tumor effects (H. Chen et al., 2020; Li et al., 2022; M.-H. Li et al., 2021). Does lycorine have a similar anti-inflammatory effect on ALI? Could it be used as a medicine in the clinical treatment of ALI? Previous studies had shown that lycorine can induce HSC-3 cell apoptosis and inhibit cell proliferation (W.-y. Liu et al., 2019). In addition, it has been found that lycorine can increase the production of reactive oxygen species (ROS) and trigger mitochondrial membrane potential (MMP) disorders(Jing, Zhang, Li, & Gao, 2020; Shang, Jang, Shi, & Ma, 2021). It was also found that lycorine significantly inhibited the expression of CXCL1 and IL-1α in the senescence-associated secretion phenotype (SASP) of SIPS cells and slowed down senescence(Y. Xu, Li, Li, Deng, & Gao, 2023; W. N. Zhang et al., 2021). However, few reports show lycorine can reduce lung injuries caused by inflammation and oxidative stress. Whether lycorine has a protective effect on lung injury needs further study. Lycorine could reduce the inflammatory response of LPS-induced by destroying the lipid rafts was not yet clear. This mechanism remains to be explored.Materials and methodsReagentsLycorine (L812279) was purchased from MACKLIN reagent, China. LPS (S11060) was purchased from Yuanye biotech, Shanghai. UItraRIPA kit for Lipid Raft (KA6023) was purchased from Bioleaf, Shanghai. The primers were purchased from Sangon Biotech, Shanghai. The antibodies were purchased from CST, USA. CCK-8 (BS350B) kit was purchased from Biosharp, China. MPO assay kit (EHJ-45871m) was purchased from HUIJIA BIOTECHNOLOGY, China. The ELISA kit of IL-1β, IL-6, and THF-α was purchased from LunChangShuo Biotech, China. LXR-Luc(11515ES) was purchased from Yeasen Bio, China. A549 cells were donated by Zhang Naisheng’s team at Jilin University. GSK2033 (SML1617) was purchased from Sigma Aldrich, USA.2.2. Animals and groupsFifty C57 mice (6 weeks of age, 18-25 g) were divided equally between male and female. All mice were randomly divided into 5 groups: control group (CG), LPS group (LPS), and LPS+lycorine (20, 40, 80 mg/kg) group (20, 40, 80). LPS-induced acute lung injury and administration were as follows: In brief, ALI was induced by inhalation of 50 μl 2 mg/mL LPS through the nose in each mouse after injected lycorine (20, 40, 80 mg/kg) or saline intraperitoneally(F. Wang et al., 2009). The drug was injected twice in total intraperitoneally at 12-hour intervals. The control group was injected with saline. The lycorine group was injected with different doses of lycorine hydrochloride solution (20, 40, 80 mg/kg). All mice survived within 36 h after LPS intranasal infusion. All mice were raised at room temperature and anaesthetized with sodium pentobarbital 24 hours after the second intraperitoneal injection. They died of cervical dislocation and were quickly sampled and store in the -80 °C refrigerator. All the procedures in the present study were carried out following the Animal Care and Use Committee of Northeast Agricultural University (SRM-16).2.3. Histology analysisThe fresh lung tissue of the mice was cut into 2mm-3mm tissue pieces, fixed with 10% neutral phosphate-buffered formalin, dehydrated and transparent, and then immersed in paraffin and cut into 3-5micron paraffin tissue sections. After staining with hematoxylin and eosin, the pathological changes in lung tissues were observed with a light microscope.2.4. Detection of myeloperoxidase contentThe double antibody sandwich method was used to determine the content of myeloperoxidase (MPO) in the sample. Coat the microtiter plate with purified mouse MPO antibody to make a solid phase antibody. Add MPO to the microporous of the coated monoclonal antibody, and then combine with the HRP-labeled MPO antibody to form an antibody-antigen-enzyme-labeled antibody complex. After thorough washing, add substrate TMB for color development. We calculated the content of MPO according to the OD value.2.5. Immunofluorescence analysis of lipid raftsDewaxing paraffin sections to water. The tissue sections were placed in a repair box filled with EDTA antigen repair buffer (PH8.0) and repaired in a microwave oven. Excessive evaporation of buffer solution should be prevented during this process. BSA was dropped onto the tissue sections and incubated for 30min. The BSA was gently removed, and the prepared flotillin-1 antibody was dropped onto the sections. The sections were placed flat in a wet box at 4°C and incubated overnight. Add secondary antibody and incubate at room temperature for 50min. After the slices were shaken dry, DAPI dye was added to the ring and incubated for 10min at room temperature, away from light. The self-quenching agent was added for 5min, and the water was rinsed for 10min. Tablets were sealed with anti-fluorescence quenching tablets. The sections were photographed under a fluorescence microscope.2.6. Extraction of cell membrane proteinAdd appropriate volume of ice-cold A-buffer to tissue samples (final concentration, 5 mg/ml total protein). Sonication is recommended to completely disrupt tissue debris and avoid contamination of the nucleus. Transfer tissue lysate to 1.5 mL tubes. Centrifuge samples at 10000 rpm for 5 min. Transfer supernatant to another tube. Add 0.5 mL of ice-cold A-buffer into the pellet (RIPA-insoluble fraction) and vigorously re-suspend the pellet with pipetting or voltas. Centrifuge samples at 10000 rpm for 5 min. Remove supernatant and add 100 μL of B-buffer into the pellet and vigorously re-suspended the pellet with pipetting or voltas at room temperature (option: sonication can be available on ice). Incubate for 5 min at room temperature. Centrifuge samples at 10000 rpm for 5 min. Collect the supernatant into a new tube.2.7. Cholesterol levels assay in cell membraneMeasure the absorbance values of the calibration standard tube and the sample tube at 510nm respectively, and calculate the cholesterol content. Cholesterol esters are broken down into cholesterol fatty acids under the action of cholesterol esterase. Cholesterol and oxygen generate hydrogen peroxide under the action of cholesterol oxidase. Hydrogen peroxide, 4-AAP, and phenol will produce red quinone under the action of peroxidase, and its color is directly proportional to the content of cholesterol. Measure the absorbance values of the calibration standard tube and the sample tube at 510nm respectively, and calculate the cholesterol content.2.8. cell culture and treatmentThe A549 cells were cultured adherently in a DME/F-12 medium. This medium contains 10% heat-inactivated fetal bovine serum (FBS) or 1% 100 units of penicillin and 100ug/ml streptomycin. The cells were cultured in a sterile incubator containing 5% CO2 at 37 °C. When the cell coverage in the culture flask is 80%-90%, cell passaging is required. When passaging, discard the dead cells and the original medium. Added 2 ml trypsin for digestion, until the cells do not adhere to the wall. Then add the medium to terminate the digestion quickly, transfer the cells to a 14 ml centrifuge tube with a dropper, and centrifuge at 1000 rpm for 5 min. Discard the supernatant, add 2 ml of medium, and gently pipette to mix the cells. Divide into two new culture flasks to prepare the culture medium. After the passage to the third generation, when the cells had expanded to a sufficient number, they were cultured in 6-well plates and treated separately.2.9. LXRα gene assayA549 cells were cultured in a medium supplemented with LXR luciferase reporter plasmid (LXR-Luc) and β-galactosidase control vector for 24 h. Others were cultured in a medium supplemented with LXR inhibitor GSK2033. A549 cells were pretreated with lycorine (20,40,80 mg/L). After 1 hour, the culture medium was poured out and LPS (3mg/kg) was added for 24 hours. Luciferase activity was detected. The transcriptional activity of the LXR-Luc assay system was compared with that of the β-galactosidase normal group. Cell culture supernatants were collected and the levels of TNF-α, IL-1β, and IL-6 were determined by ELISA after transfection with A549.2.10. Molecular docking analysis of LXRα and lycorineChemBioDraw Ultra 14.0 was used to draw small molecules, and the small molecules were imported into ChemBio3D Ultra 14.0 for energy minimization. The Minimum RMS Gradient was set to 0.001, and the small molecules were saved in MOL2 format. The optimized small molecules were imported into AutoDockTools-1.5.6 for hydrogenation, charge calculation, charge distribution, and rotatable bond setting and then kept in ”PDBQT” format. Download the LXRα structure (PDB ID: 3FAL) from the PDB database. Pymol2.3.0 was used to remove the protein crystal water and original ligand. The protein structure was imported into AutoDocktools (V1.5.6) for hydrogenation, charge calculation, charge distribution, and atom type designation and saved in ”PDBQT” format. AutoDock Vina1.1.2 was used for docking, and LXRα parameters were set as: center_x = 64.711, center_Y = 37.098, center_z = 23.658; The search space: size_x: 50, size_y: 50, size_z: 50 each lattice spacing is 0.375 (A) and exhaustiveness: 10, the rest of the parameters as the default Settings. PyMOL2.3.0 and LIGPLOT V 2.2.4 were used to analyze the interaction mode of the docking results.2.11. Fluorescence quantitative PCRTotal RNA was extracted from mice lung tissue and A549 cells. The concentration and purity of the RNA solution were determined by ultraviolet spectrophotometry at 260 nm and 280 nm. A single cDNA template targeting TNF-α, IL-1β, IL-6, TLR4, NF-κB, LXRα, ABCA1, ABCG, specific primers were synthesized by reverse transcription design based on a known sequence of β-actin. Real-time quantitative PCR was performed using the ABI PRISM 7500 processing system. For each gene to be measured, a cDNA template and sample cDNA defining the expressed gene is selected for the PCR reaction. There are 40 cycles, such as 95 °C for 15 s, 60 ℃ for 60 s, and 72 °C for 20 s. Each experiment was repeated three times and each sample was repeated three times. The β-actin was used as an endogenous internal standard control.2.12. ELISA assayThe double sandwich antibody method was used to detect the concentration of IL-1β, IL-6, IL-10, and TNF-α in mouse tissues and A549 cells. The tissues were weighed and rinsed with pre-chilled PBS. The tissue was ground with PBS (Simple: PBS=1:9) thoroughly with a glass homogenizer. The supernatant was taken after being centrifuged at 5000 rpm for 10 min. The cell culture supernatant was 2000rpm for 20 min to remove impurities and cell debris. The supernatant was tested. The anti-mouse antibody is coated on the ELISA plate. The cell factor in the sample was combined with the anti-mouse antibody. Then the horseradish peroxidase-labeled antibody is added, and the chromogenic substrate TMB is added. After the stop reaction solution was added. To measure the OD value with a microplate reader at 450nm wavelength. We can calculate the cytokine concentration in the sample by drawing a standard curve.2.13. Western blot analysisTotal protein was extracted from mouse lung tissue and A549 cells. The protein concentration was determined by the BCA method. Separate the sample using an agarose SDS gel and transfer it to the NC membrane. The membrane was blocked with Tris-buffered saline (TBST) containing 5% skim milk at room temperature for 2 hours and then incubated with a specific primary antibody (1:1000) overnight. Subsequently, the membrane was washed with TBST and then incubated with a secondary antibody at room temperature for 1 hour. Wash the batch with TBST again, and then use BCL luminescent color developing solution to take pictures under the imaging system to analyze the brightness.2.14. Statistical analysisSPSS Statistical 19 was used for statistical analysis. The statistics are represented by an average of ± S.E.M. for three separate experiments. Differences between groups were analyzed by one-way ANOVA or Student t test. # p < 0.01 vs. the control group, * p < 0.05 vs. the LPS group, ** p < 0.01 vs. the LPS group.
Role of Non-invasive ventilation in the management of obstructive sleep apnea in chil...
* NNagarjun
Bharath Reddy

* NNagarjun

and 2 more

April 20, 2024
Clinical Correspondence
Impact of COVID-19 on Health Systems and household level OOPE: Evidence from a develo...
Ananda Meher
Sarit Rout

Ananda Meher

and 3 more

April 20, 2024
Background & Objective : Covid-19 caused insurmountable misery to individuals and health systems and caused millions of infections and deaths globally. The situation was not different in India. This study based upon primary household survey generated evidence on the health seeking behavior during COVID 19, OOPE (Out Of Pocket Expenditure) due to COVID related hospital visits and how a federal unit under the India union responded to the crisis. Methodology: The study collected primary data from a representative sample of 3,584 households and 276 COVID-19 positive patients who received treatment in an institution or hospital as in-patients were selected from four district of Odisha, India. Descriptive statistics like mean, median and percentage were used to present the findings of the study. Results: More than half of the sample households faced difficulty in accessing health services during the COVID and a majority of them had difficulty due to non-availability of transport facility followed by closure of medical facilities. Our findings further suggested that 53% of the households in the first wave and 63% in the second wave did not pay any anything out of their pocket for availing outpatient care services. For inpatient care, 70% in the first wave and 62% in the second wave did not spend anything from their pocket. It was also observed that a majority around 90% in the wave 1 and 74% in the wave 2 accessed public health facilities for Covid related inpatient care. From among those incurred any OOPE, the average OOPE for the outpatient visit was INR 2312 in the wave 1 and INR 2694 in the wave 2. Similarly for the inpatient care, it was Rs 21,045 in the wave 1 and Rs 1,09,335 in the wave 2. Conclusion: Our findings offer crucial insights into the health-seeking behavior of individuals and the difficulties experienced by both COVID and non-COVID-19 patients during the pandemic. Moreover, the findings suggested that the initiatives introduced by the state government resulted in averting OOPE by many households. Learning from managing large disasters experienced earlier, the state’s health management strategies were unique which resulted in more individuals accessed care from public health systems and incurred less OOPE.
The Stealthy Bleeder: A Case of Dieulafoy Lesion in Lower Gastrointestinal Tract
Nida Ansari
Sacide S. Ozgur

Nida Ansari

and 6 more

April 20, 2024
Introduction:Lower gastrointestinal bleeding (LGIB) is a significant clinical concern, accounting for about 30% of major gastrointestinal bleeding episodes requiring hospitalization. While upper gastrointestinal sources are more common, lower GI bleeding presents a diverse array of potential etiologies, ranging from diverticulosis and angioectasias to ischemic colitis, neoplasms, and hemorrhoids [1].Dieulafoy lesions represent a unique vascular anomaly within the GI tract, characterized by an abnormally large submucosal artery that erodes the overlying mucosa without an associated ulcer or erosion, potentially leading to significant bleeding [2]. Dieulafoy lesions stand out as a rare but noteworthy cause of LGIB, constituting about 2% of acute GI bleeds [3]. These lesions are more commonly associated with the upper GI tract, typically in the stomach near the gastroesophageal junction, due to the vascular supply from the left gastric artery branches. However, they can occur throughout the GI tract, including the colon, though this presentation is rare [2,4].The pathogenesis of Dieulafoy lesions is not completely understood, but arterial wall necrosis leading to rupture has been suggested. Additionally, risk factors such as NSAIDs, tobacco, alcohol use, and peptic ulcer disease may exacerbate the potential for bleeding from these lesions [2]. The diagnosis is typically made endoscopically, with criteria including the presence of a protruding vessel or active bleeding from a small mucosal defect surrounded by normal tissue [2].Endoscopic intervention remains the cornerstone of treatment, with mechanical modalities like band ligation and hemostatic clips being highly effective. Combination therapy has been shown to be superior to monotherapy in achieving hemostasis, which is successful in approximately 80-85% of cases [2].The case we present emphasizes the importance of considering Dieulafoy lesions in the differential diagnosis of LGIB, given their potential for significant blood loss and the effectiveness of prompt endoscopic intervention in resolving bleeding and stabilizing patients.
Decoding the Hysteretic Behavior of Hydraulic Variables in Lowland Rivers with Multiv...
K. Kim
Marian Muste

K. Kim

and 3 more

April 20, 2024
This paper demonstrates that the multivariate monitoring methods are capable to underpin the systematic investigation of the hysteretic behavior occurring during gradually-varied flows. For this purpose, we present simultaneous measurements of stage, index velocity, and free-surface slope acquired continuously with high-frequency sampling instruments deployed at several river gauging sites exposed to a range of storm magnitudes. The experimental evidence reveals intrinsic features of unsteady open-channel flow mechanics that are hinted by pertinent governing equations but rarely substantiated with in-situ measurements. The illustrations are intentionally made for fluvial waves propagating at sites located in lowland areas where the relationships among flow variables are most likely displaying hysteretic loops and phasing in the hydraulic variable progression. The set of presented measurements highlights that: a) the hysteretic behavior is apparent in both time-independent and time-dependent graphical representations of any two of the hydraulic variables; b) the severity of the hysteresis is commensurate with the geomorphic, hydraulic, and hydrological characteristics of the measurement site; and c) there is a pressing need for changing the flow paradigms currently used in tracking flow variables during gradually-varied flows. Also discussed are research needs associated with flow hysteresis for advancing the understanding of the mechanisms underlying the movement and storage of water in the lowland river environments as well as for increasing the accuracy of streamflow monitoring, modeling, and forecasting.
Study of soil organic carbon transported by erosion post wildfire: case of La Galite...
Oussama Mbarki
Hatem Ibrahim

Oussama Mbarki

and 3 more

April 20, 2024
The soil organic carbon stock (SOC) is an important element which plays a principal role in climate change. Due to wildfire in forest ecosystems, the changes in SOC stock are among the relevant research issues. The accelerated erosion that occurs after loss organic matter is a major factor affecting the sustainability of these environments. This study aimed to assessment the water erosion on soil SOC stock after wildfire on the island “La Galite Archipelago”. This assessment was studied using the empirical erosion model RUSLE (Revised Universal Soil Loss Equation). Data was collected on different sampling points of the La Galite for measurements and calculations of carbon stocks. The results showed that the SOC stock varied between 11 and 49 t/ha, the erosion carbon map showed that after wildfire of La Galite Archipelago, most of the areas affected by the fire belongs in the highest severity class of susceptibility (> 50%) of organic carbon.
Evaluating kinship estimation methods for reduced-representation SNP data in non-mode...
Eilish McMaster
Patricia Lu-Irving

Eilish McMaster

and 4 more

April 20, 2024
Kinship estimation is widely used in ecological and evolutionary research, particularly in studies of human genealogy and genome-wide associations. In conservation, restoration, agriculture, and forestry, identifying relationships between individuals can be crucial for successful population management and can provide insight into inheritance patterns. Kinship estimation methods are typically designed for large datasets with hundreds of thousands of single-nucleotide polymorphisms. However, studies of non-model species often use much smaller datasets obtained using reduced-representation sequencing. To evaluate the performance of kinship estimation methods under these circumstances, we applied six algorithms to datasets from six non-model Australian flowering plant species (_Acacia terminalis_, _Acacia suaveolens_, _Banksia serrata_, _Banksia aemula_, _Hakea sericea_, and _Hakea teretifolia_), encompassing 3,390 individuals and 369 families. Our results show different performances of kinship methods on reduced-representation sequence data compared with prior evaluations. PC-Relate, RelateAdmix, and Goudet’s beta dosage exhibited limited precision, KING Homo and KING Robust demonstrated high precision with limited sensitivity, while PLINK displayed variable sensitivity and precision. The sensitivity and precision of the methods were affected in various ways by filtering parameters; each method showed its best performance under different thresholds for minor allele frequency and locus missingness. We also present a case study that illustrates a practical application of the methods, demonstrating how estimates of kinship can inform management of seed production areas of the broadleaf hopbush (_Dodonaea viscosa_). Based on our findings, we offer specific recommendations for utilizing kinship estimation methods in studies of reduced-representation sequence data from non-model species.
The COX-2 Inhibitor that Went Wrong and Caused More Pain Than Relief: Valdecoxib
Syed Mohammad Habib
Majid Ali

Syed Mohammad Habib

and 1 more

April 20, 2024
A document by Syed Mohammad Habib. Click on the document to view its contents.
Aeromonas hydrophila-induced necrotizing fasciitis complicated by psoriasis and diabe...
Jiangling Yao
Qian Wu

Jiangling Yao

and 8 more

April 20, 2024
A document by Jiangling Yao. Click on the document to view its contents.
FAHR’S SYNDROME SECONDARY TO HYPOPARATHYROIDSM MIMICKING AS PARKINSON’S DISEASE: A CA...
Shritik Devkota
Samiksha Lamichhane

Shritik Devkota

and 4 more

April 20, 2024
INTRODUCTION:Fahr’s disease or Fahr’s syndrome is characterized by the calcification of basal ganglia and cerebral cortex, which is usually transmitted in an autosomal dominant manner. It is a rare neurological condition and most of the patients with the disease condition present with movement disorders, tremors, dyskinesia, and sometimes gait disturbances, cognitive impairment, speech disturbances, psychiatric changes such as mania, sensory changes or even pain [1-3]. Fahr’s disease should be differentiated from Fahr’s syndrome, which is usually secondary to underlying systemic pathology, this could be differentiated with blood tests for serum calcium, iPTH, along with other routine blood investigations. Moreover, basal ganglia calcification seen in CT scans could radiologically mimic the disease condition, thus clinical correlation with radiological investigations are the key in the diagnosis of Fahr’s disease [2, 4, 5]. Here, we present a case of a 65-year-old male, with Fahr’s syndrome secondary to hyperparathyroidism which initially mimicked as Parkinson’s disease and later improved after starting the patient on vitamin D and calcium carbonate therapy.
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