Nitroimidazole antibiotics, including metronidazole, tinidazole, and ornidazole, are widely used to treat anaerobic infections and parasitic diseases. While their efficacy is well-established, comprehensive safety profiles, especially for rare adverse events, remain incompletely characterized. This study aimed to systematically evaluate the safety signals of these drugs using the FDA Adverse Event Reporting System (FAERS) database from 2014 to 2024. Disproportionality analyses were performed at the System Organ Class (SOC) and Standardized MedDRA Queries (SMQ) levels to identify associations between nitroimidazole antibiotics and adverse events. A total of 17631 adverse event reports were analyzed for metronidazole, tinidazole, and ornidazole, respectively. Female patients accounted for the majority of reports (57.35%, 51.70%, and 61.11%, respectively), likely reflecting their clinical use in gynecological infections. Metronidazole exhibited the shortest median time to adverse event onset (2.5 days), while tinidazole had the longest (5.5 days). At the SOC level, all three drugs showed positive associations with gastrointestinal, nervous system, and cardiac disorders. Ornidazole displayed strong positive signals for vascular (IC025 = 18.46) and skin disorders (IC025 = 17.46), while tinidazole had weaker but notable associations with skin and blood disorders. Critically, SMQ-level analysis revealed significant signals not currently highlighted in drug labels, including acute pancreatitis, hepatic failure, fibrosis/cirrhosis, and tachyarrhythmias for tinidazole and ornidazole. These findings suggest the need for enhanced clinical monitoring of hepatic and cardiac function during treatment with these agents. Despite limitations inherent to spontaneous reporting data, this study provides valuable insights into both known and previously underrecognized risks associated with nitroimidazole antibiotics, underscoring the importance of ongoing pharmacovigilance to optimize patient safety.