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Identification of plant peroxidases catalyzing the degradation of polyfluorinated aromatics using a peroxidase library approach
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  • Gregory Raner,
  • Hector Medina,
  • Carson Farmer,
  • Ashton Ware,
  • Sally Hess,
  • Sierra Numer,
  • Jack Gregory,
  • David Gligor
Gregory Raner
Liberty University

Corresponding Author:graner@liberty.edu

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Hector Medina
Liberty University
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Carson Farmer
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Ashton Ware
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Sally Hess
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Sierra Numer
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Jack Gregory
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David Gligor
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Abstract

In this work, the degradation of mono- and polyfluorinated phenolic compounds was demonstrated by a series of crude plant peroxidases, including horseradish root and 6 members of the cucurbita genus. Highly active samples were identified using a library screening approach in which more than 50 crude plant samples were initially evaluated for defluorination activity toward 4-fluorophenol. The highest concentrations were observed in the horseradish root (HRP), pumpkin skin (PKS), and butternut squash skin (BNS), which consistently gave the highest intrinsic rates of decomposition for all the substrates tested. While HRP exhibited a significant decrease in activity with increased fluorination of the phenolic substrate, PKS showed only minor reductions. Furthermore, in silico studies indicated that the active site of HRP poorly accommodates the steric bulk of additional fluorines, causing the substrate to dock farther from the catalytic heme and thus slowing the catalysis rate. We propose that the PKS active site might be larger, allowing closer access to the perfluorinated substrate, and therefore maintaining higher activity compared to the HRP enzyme. However, detailed kinetic characterization studies of the peroxidases are recommended. Conclusively, the high catalytic activity of PKS and its high yield per gram of tissue make it an excellent candidate for developing environmentally friendly biocatalytic methods for degrading fluorinated aromatics. Finally, the success of the library approach in identifying highly active samples for PFAC degradation suggests the method may find utility in the quest for other advanced catalysts for PFAS degradation