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A novel peptide biosensor for screening ABL1 activity in vitro: a challenge for precision therapy in BCR-ABL1 and BCR-ABL1 like leukemias.
  • +7
  • Oksana Montecchini,
  • Stefania Braidotti,
  • Raffaella Franca,
  • Giulia Zudeh,
  • Christian Boni,
  • Claudio Sorio,
  • Marco Rabusin,
  • Alberto Tommasini,
  • Giuliana Decorti,
  • Gabriele Stocco
Oksana Montecchini
University of Trieste
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Stefania Braidotti
University of Trieste
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Raffaella Franca
University of Trieste Clinical Department of Medical Surgical and Health Sciences
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Giulia Zudeh
University of Trieste
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Christian Boni
University of Verona
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Claudio Sorio
University of Verona
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Marco Rabusin
IRCCS Materno Infantile Burlo Garofolo
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Alberto Tommasini
IRCCS Materno Infantile Burlo Garofolo
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Giuliana Decorti
University of Trieste Clinical Department of Medical Surgical and Health Sciences

Corresponding Author:decorti@units.it

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Gabriele Stocco
University of Trieste
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Abstract

The pathogenic role of the overactivated ABL1 tyrosine kinase (TK) pathway is well recognized in some forms of BCR-ABL1 like acute lymphoblastic leukemia (ALL); TK inhibitors represent a useful therapeutic choice in these patients who respond poorly to conventional chemotherapy. Here we report a novel peptide biosensor (PABL)-ELISA assay to investigate ABL1 activity in four immortalized leukemic cell lines with different genetic background. The PABL sequence comprises an ABL1 tyrosine (Y) phosphorylation site and a targeting sequence which increases the specificity for ABL1; additional peptides (Y-site-mutated (PABL-F) and fully-phosphorylated (PPHOSPHO-ABL) biosensors) were included in the assay. After incubation with whole cell lysates, average PABL phosphorylation was significantly increased (basal versus PABL phosphorylation: 6.84 ± 1.46% versus 32.44 ± 3.25%, p-value < 0.0001, two-way ANOVA, Bonferroni post-test, percentages relative to PPHOSPHO-ABL in each cell line). Cell lines expressing ABL1-chimeric proteins (K562, ALL-SIL) presented the higher TK activity on PABL; a lower signal was instead observed for NALM6 and REH (p<0.001 and p<0.05 versus K562, respectively). Phosphorylation was ABL1-mediated, as demonstrated by the specific inhibition of imatinib (p<0.001 for K562, NALM6, ALL-SIL and p<0.01 for REH) in contrast to ruxolitinib (JAK2-inhibitor), and occurred on the ABL1 Y-site, as demonstrated by PABL-F whose phosphorylation was comparable to basal levels. While requiring further optimization and validation in leukemic blasts to be of clinical interest, the PABL-based ELISA assay provides a novel in vitro tool for screening both the aberrant ABL1 activity in BCR-ABL1 like ALL leukemic cells and their potential response to TK inhibitors.