Bioinformatics in Plant Sciences: A model for training the next
generation of data-enabled/fluent scientists
Shawn Thomas
Division of Biological Sciences, University of Missouri, Columbia, MO 65211, Division of Biological Sciences, University of Missouri, Columbia, MO 65211
Corresponding Author:skt2qw@mail.missouri.edu
Author ProfileAbstract
Generating data has become cheaper and easier, but alone is not
sufficient to answer biological questions – data must be analyzed and
interpreted. However, many algorithms can create or exacerbate biases
(e.g., facial-recognition, ancestry, and disease risk). This
necessitates incorporating diverse perspectives to confront both the
moral and technical “big data challenges”. To move to a future where
this is possible, it is necessary for researchers to develop skills in
data management, processing, and analytics. Specifically, the field of
plant phenotyping has moved from time consuming hand measurements to the
use and development of high-throughput phenotyping. These systems
require data-enabled/fluent users, yet academic programs in biology do
not provide sufficient data science training. Here we present the
Bioinformatics in Plant Science (BIPS) program at the University of
Missouri (MU) as a model for training the next generation of
data-enabled/fluent scientists. BIPS aims to mentor undergraduate
students to build foundational skills in plant biology, research, and
computational science. Our program pairs biology and computer science
students to address biological questions through computational methods,
with many focusing on plant phenotyping methods. The students learn to
tackle problems using multidisciplinary approaches, alongside learning
how to work in teams while building science communication skills (e.g.,
professional conferences, research forums, presenting to lawmakers).
Through peer learning, BIPS students can understand and incorporate
diverse perspectives from both the biological and computational side to
address one of NSF’s 10 big ideas: harnessing the data revolution.