Supplemental Tables & Figures
Table S1 The detailed information of each sample of goldfish
(Carassius auratus ), including summary for genome resequencing
data, individual genetic diversity, ROH detection and mitogenome
Table S2 The putative selective sweep regions identified
between invasive and source populations
Table S3 Candidate genes obtained by annotation of SNPs within
selective sweep regions
Table S4 The top 20 of enriched GO terms for candidate genes
under selection in goldfish (Carassius auratus ) after invasion to
the Tibet Plateau
Figure S1 The analysis of allele frequency distributions at
biallelic variants clearly showed one Gaussian with 0.5 in diploids (a)
and two Gaussians with 0.33 and 0.67 (b) in triploids.
Figure S2 The maximum-likelihood phylogenetic tree based on
mitogenome sequences of all samples. The circles and triangles
represented the diploid and triploid samples, respectively.
Figure S3 Neighbor-joining clustering of diploids (a) and
triploids (b) based on pairwise genetic distances calculated from
genomic LD-pruned SNPs.