Isolate names in bold indicate species for which genomic DNAs were combined to make the mock community. The remaining “isolates” refer to OTU identifications that were recovered after amplification, sequencing, and bioinformatic processing.Lengths with ^ indicate that the number is an estimate due to the reference sequence missing one or more priming sites. Lengths with + indicate that the length is an estimate based on a different isolate of the same species, with the exception of Dimargaris xerosporica for which estimates are based on the only species with available rDNA sequences, D. bacillispora . Bolded GenBank accession numbers indicate isolates newly sequenced for this study.
Table 2. Results of PERMANOVA and whether ANOVA analyses of theB sim output were significant for all fungi and early diverging fungal (EDF) communities recovered by each primer set (ITS1F/ITS2, LROR/LR3, LR22F/LR3) by sites within states (California, CA and Florida, FL) and by sample type (including invertebrates, mud, soil, and water), as well as the interaction between site and sample type, with asterisks indicating significant p-values (<0.05).