Genome survey
Genome size (Mb) 1384.88
Heterozygosity 1.04%
Repetive sequence proportion 54.79%
PacBio assembly
Total length (Mb) 1,465.32
GC content 37.53%
Contig number 9,015
Max length (bp) 3,793,399
N50 (bp) 472,841
N90 (bp) 77,864
Hi-C assembly
Total length (Mb) 1,466.12
Scaffold number 1,063
Max length (bp) 48,777,264
N50 (bp) 36,870,704
N90 (bp) 24,342,607
Pseudochromosome number (2n) 86
unplaced scaffold (Mb) 14.60
Place rate 99.00%
Annotation
Repetitive sequence proportion 57.73%
Total gene number 25,026
Average length (bp) 11,290
Annotated gene number 19,192