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Transmission network and phylogenetic analysis highlight the role of suburban population in HIV-1 transmission among older adults in Nanjing, Jiangsu Province, China
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  • Xin Li,
  • Hui Shi,
  • Hongjie Shi,
  • Yuanyuan Xu,
  • Sushu Wu,
  • Rong Wu,
  • Xin Yuan,
  • Jingwen Wang,
  • Zhengping Zhu
Xin Li
Nanjing Municipal Center for Disease Control and Prevention
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Hui Shi
National Health Commission Contraceptives Adverse Reaction Surveillance Center
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Hongjie Shi
Nanjing Municipal Center for Disease Control and Prevention
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Yuanyuan Xu
Nanjing Municipal Center for Disease Control and Prevention
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Sushu Wu
Nanjing Municipal Center for Disease Control and Prevention
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Rong Wu
Nanjing Municipal Center for Disease Control and Prevention
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Xin Yuan
Nanjing Municipal Center for Disease Control and Prevention
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Jingwen Wang
Nanjing Municipal Center for Disease Control and Prevention
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Zhengping Zhu
Nanjing Municipal Center for Disease Control and Prevention

Corresponding Author:zzp@njcdc.cn

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Abstract

Description of the transmission characteristics among older adults is helpful for the tailored interventions. Epidemiological investigation combined with phylogenetic analysis were performed to reveal potential transmission linkage among the older people in Nanjing. During 2018-2022, 188 pol sequences were successfully amplified. Multiple genotypes were identified, including CRF07_BC (55.3%), CRF01_AE (30.3%), CRF08_BC (8.0%), B (3.2%), CRF55_01B (1.1%), CRF67_01B (0.5%),CRF68_01B (0.5%), and unique recombinant forms (URF) (1.1%). Transmission network analysis found 120 genetically linked patients forming 23 clusters (2-26 individuals). Multivariable logistic regression analysis showed that compared with farmers and heterosexuals, patients with other occupation (OR= 0.404, 95% CI:0.173-0.945) and MSM (OR= 0.193, 95% CI:0.050-0.738) were less likely to have high linkage. Subjects who lived in suburban places were more likely to have high linkage (OR= 10.932, 95% CI:3.335-35.830). The Sankey diagram suggested that patients who lived in suburban places mainly transmitted the disease within the locally district (χ 2=24.192, P<0.001). Among 188 pol segments, the prevalence of pretreatment drug resistance was 8%. In suburban places with an increasing HIV-1 epidemic, there is a need to improve early detection and timely treatment. More tailored interventions for this subgroup are urgently needed.
Submitted to Journal of Medical Virology
01 Apr 2024Submission Checks Completed
01 Apr 2024Assigned to Editor
01 Apr 2024Review(s) Completed, Editorial Evaluation Pending
05 Apr 2024Reviewer(s) Assigned
01 Jun 2024Editorial Decision: Revise Major
28 Jun 2024Review(s) Completed, Editorial Evaluation Pending
29 Jun 2024Reviewer(s) Assigned
19 Sep 2024Editorial Decision: Revise Minor
09 Oct 20242nd Revision Received
10 Oct 2024Submission Checks Completed
10 Oct 2024Assigned to Editor
10 Oct 2024Review(s) Completed, Editorial Evaluation Pending
18 Oct 2024Editorial Decision: Accept